Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 AL136301.1-201ENST00000615830 422 ntBASIC14.15□□□□□ -0.14
NDUFS4O43181 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFS4O43181 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFS4O43181 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFS4O43181 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFS4O43181 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFS4O43181 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.15□□□□□ -0.14
NDUFS4O43181 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFS4O43181 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFS4O43181 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.15□□□□□ -0.14
NDUFS4O43181 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFS4O43181 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
NDUFS4O43181 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFS4O43181 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NDUFS4O43181 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
NDUFS4O43181 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.15□□□□□ -0.14
NDUFS4O43181 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.14□□□□□ -0.15
NDUFS4O43181 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.14□□□□□ -0.15
NDUFS4O43181 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
NDUFS4O43181 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFS4O43181 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.14□□□□□ -0.15
NDUFS4O43181 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFS4O43181 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFS4O43181 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFS4O43181 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFS4O43181 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFS4O43181 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFS4O43181 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFS4O43181 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFS4O43181 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFS4O43181 HIST2H2BB-201ENST00000449108 381 ntBASIC14.14□□□□□ -0.15
NDUFS4O43181 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.14□□□□□ -0.15
NDUFS4O43181 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.14□□□□□ -0.15
NDUFS4O43181 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.14□□□□□ -0.15
NDUFS4O43181 DUX4L45-201ENST00000566406 1057 ntBASIC14.14□□□□□ -0.15
NDUFS4O43181 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.14□□□□□ -0.15
NDUFS4O43181 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.14□□□□□ -0.15
NDUFS4O43181 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.14□□□□□ -0.15
NDUFS4O43181 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFS4O43181 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.14□□□□□ -0.15
NDUFS4O43181 AL359881.2-201ENST00000602973 570 ntBASIC14.14□□□□□ -0.15
NDUFS4O43181 AC009542.2-202ENST00000619004 1067 ntBASIC14.14□□□□□ -0.15
NDUFS4O43181 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NDUFS4O43181 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.14□□□□□ -0.15
NDUFS4O43181 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.14□□□□□ -0.15
NDUFS4O43181 AC026748.1-201ENST00000624349 3251 ntBASIC14.14□□□□□ -0.15
NDUFS4O43181 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFS4O43181 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.14□□□□□ -0.15
NDUFS4O43181 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.14□□□□□ -0.15
NDUFS4O43181 AC015688.4-201ENST00000580780 1647 ntBASIC14.14□□□□□ -0.15
NDUFS4O43181 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.14□□□□□ -0.15
NDUFS4O43181 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
NDUFS4O43181 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFS4O43181 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFS4O43181 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
NDUFS4O43181 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.14□□□□□ -0.15
NDUFS4O43181 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFS4O43181 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
NDUFS4O43181 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFS4O43181 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
NDUFS4O43181 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFS4O43181 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NDUFS4O43181 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
NDUFS4O43181 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
NDUFS4O43181 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.13□□□□□ -0.15
NDUFS4O43181 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFS4O43181 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFS4O43181 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFS4O43181 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFS4O43181 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFS4O43181 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NDUFS4O43181 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFS4O43181 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFS4O43181 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.13□□□□□ -0.15
NDUFS4O43181 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFS4O43181 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NDUFS4O43181 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFS4O43181 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFS4O43181 AL023775.1-201ENST00000454907 1746 ntBASIC14.13□□□□□ -0.15
NDUFS4O43181 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NDUFS4O43181 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFS4O43181 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFS4O43181 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.13□□□□□ -0.15
NDUFS4O43181 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFS4O43181 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
NDUFS4O43181 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
NDUFS4O43181 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.13□□□□□ -0.15
NDUFS4O43181 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFS4O43181 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFS4O43181 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFS4O43181 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.13□□□□□ -0.15
NDUFS4O43181 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.13□□□□□ -0.15
NDUFS4O43181 CHMP1AP1-201ENST00000445563 662 ntBASIC14.13□□□□□ -0.15
NDUFS4O43181 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFS4O43181 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFS4O43181 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NDUFS4O43181 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NDUFS4O43181 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.13□□□□□ -0.15
NDUFS4O43181 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.13□□□□□ -0.15
NDUFS4O43181 AL008721.1-201ENST00000609964 604 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms