Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLOCKO15516 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.12□□□□□ -0.15
CLOCKO15516 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.12□□□□□ -0.15
CLOCKO15516 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.12□□□□□ -0.15
CLOCKO15516 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLOCKO15516 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLOCKO15516 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLOCKO15516 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLOCKO15516 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLOCKO15516 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLOCKO15516 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLOCKO15516 AC015922.1-201ENST00000421102 1152 ntBASIC14.12□□□□□ -0.15
CLOCKO15516 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.12□□□□□ -0.15
CLOCKO15516 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.12□□□□□ -0.15
CLOCKO15516 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.12□□□□□ -0.15
CLOCKO15516 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLOCKO15516 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
CLOCKO15516 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.12□□□□□ -0.15
CLOCKO15516 HLA-V-204ENST00000476601 1289 ntBASIC14.12□□□□□ -0.15
CLOCKO15516 AC004890.2-204ENST00000481968 304 ntBASIC14.12□□□□□ -0.15
CLOCKO15516 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLOCKO15516 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.12□□□□□ -0.15
CLOCKO15516 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.12□□□□□ -0.15
CLOCKO15516 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLOCKO15516 SAMD11P1-201ENST00000571429 661 ntBASIC14.12□□□□□ -0.15
CLOCKO15516 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.12□□□□□ -0.15
CLOCKO15516 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.12□□□□□ -0.15
CLOCKO15516 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.12□□□□□ -0.15
CLOCKO15516 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.12□□□□□ -0.15
CLOCKO15516 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.12□□□□□ -0.15
CLOCKO15516 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.12□□□□□ -0.15
CLOCKO15516 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLOCKO15516 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLOCKO15516 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLOCKO15516 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLOCKO15516 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLOCKO15516 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CLOCKO15516 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
CLOCKO15516 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.12□□□□□ -0.15
CLOCKO15516 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CLOCKO15516 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CLOCKO15516 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.12□□□□□ -0.15
CLOCKO15516 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.12□□□□□ -0.15
CLOCKO15516 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.12□□□□□ -0.15
CLOCKO15516 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLOCKO15516 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLOCKO15516 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLOCKO15516 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLOCKO15516 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLOCKO15516 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLOCKO15516 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CLOCKO15516 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
CLOCKO15516 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLOCKO15516 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLOCKO15516 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLOCKO15516 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.11□□□□□ -0.15
CLOCKO15516 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLOCKO15516 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLOCKO15516 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLOCKO15516 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLOCKO15516 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLOCKO15516 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
CLOCKO15516 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.11□□□□□ -0.15
CLOCKO15516 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC14.11□□□□□ -0.15
CLOCKO15516 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.11□□□□□ -0.15
CLOCKO15516 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CLOCKO15516 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CLOCKO15516 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLOCKO15516 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLOCKO15516 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CLOCKO15516 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLOCKO15516 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLOCKO15516 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLOCKO15516 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLOCKO15516 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLOCKO15516 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLOCKO15516 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.11□□□□□ -0.15
CLOCKO15516 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLOCKO15516 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLOCKO15516 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLOCKO15516 SERBP1P5-201ENST00000510079 1181 ntBASIC14.11□□□□□ -0.15
CLOCKO15516 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.11□□□□□ -0.15
CLOCKO15516 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.11□□□□□ -0.15
CLOCKO15516 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.11□□□□□ -0.15
CLOCKO15516 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.11□□□□□ -0.15
CLOCKO15516 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.11□□□□□ -0.15
CLOCKO15516 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.11□□□□□ -0.15
CLOCKO15516 AC022144.1-201ENST00000602255 1580 ntBASIC14.11□□□□□ -0.15
CLOCKO15516 AC004233.3-201ENST00000607794 1269 ntBASIC14.11□□□□□ -0.15
CLOCKO15516 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.11□□□□□ -0.15
CLOCKO15516 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLOCKO15516 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.11□□□□□ -0.15
CLOCKO15516 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CLOCKO15516 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CLOCKO15516 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CLOCKO15516 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLOCKO15516 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLOCKO15516 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLOCKO15516 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLOCKO15516 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms