Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 FRMPD2B-201ENST00000431305 1347 ntBASIC16.81■□□□□ 0.28
ATP2A1O14983 AC006480.2-201ENST00000609770 1337 ntBASIC16.81■□□□□ 0.28
ATP2A1O14983 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A1O14983 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A1O14983 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A1O14983 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A1O14983 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.81■□□□□ 0.28
ATP2A1O14983 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP2A1O14983 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A1O14983 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.81■□□□□ 0.28
ATP2A1O14983 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.81■□□□□ 0.28
ATP2A1O14983 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A1O14983 PHBP15-201ENST00000574228 665 ntBASIC16.81■□□□□ 0.28
ATP2A1O14983 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.81■□□□□ 0.28
ATP2A1O14983 MIR6769A-201ENST00000617340 73 ntBASIC16.81■□□□□ 0.28
ATP2A1O14983 AC092299.1-201ENST00000632679 757 ntBASIC16.81■□□□□ 0.28
ATP2A1O14983 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A1O14983 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A1O14983 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.81■□□□□ 0.28
ATP2A1O14983 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A1O14983 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A1O14983 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A1O14983 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.81■□□□□ 0.28
ATP2A1O14983 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ATP2A1O14983 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A1O14983 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A1O14983 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATP2A1O14983 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A1O14983 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
ATP2A1O14983 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A1O14983 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ATP2A1O14983 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A1O14983 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A1O14983 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A1O14983 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.8■□□□□ 0.28
ATP2A1O14983 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A1O14983 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.8■□□□□ 0.28
ATP2A1O14983 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC16.8■□□□□ 0.28
ATP2A1O14983 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A1O14983 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A1O14983 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A1O14983 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ATP2A1O14983 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A1O14983 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A1O14983 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A1O14983 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A1O14983 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
ATP2A1O14983 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC16.8■□□□□ 0.28
ATP2A1O14983 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.8■□□□□ 0.28
ATP2A1O14983 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A1O14983 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.8■□□□□ 0.28
ATP2A1O14983 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A1O14983 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.8■□□□□ 0.28
ATP2A1O14983 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.8■□□□□ 0.28
ATP2A1O14983 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
ATP2A1O14983 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC16.8■□□□□ 0.28
ATP2A1O14983 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.8■□□□□ 0.28
ATP2A1O14983 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
ATP2A1O14983 AC051619.9-201ENST00000623237 597 ntBASIC16.8■□□□□ 0.28
ATP2A1O14983 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.8■□□□□ 0.28
ATP2A1O14983 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A1O14983 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
ATP2A1O14983 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
ATP2A1O14983 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A1O14983 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A1O14983 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A1O14983 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ATP2A1O14983 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A1O14983 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ATP2A1O14983 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A1O14983 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
ATP2A1O14983 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP2A1O14983 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A1O14983 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.79■□□□□ 0.28
ATP2A1O14983 KHSRPP1-201ENST00000427983 1768 ntBASIC16.79■□□□□ 0.28
ATP2A1O14983 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.79■□□□□ 0.28
ATP2A1O14983 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A1O14983 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A1O14983 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A1O14983 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
ATP2A1O14983 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
ATP2A1O14983 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A1O14983 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
ATP2A1O14983 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A1O14983 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A1O14983 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A1O14983 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A1O14983 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A1O14983 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A1O14983 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A1O14983 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC16.79■□□□□ 0.28
ATP2A1O14983 TSPY25P-201ENST00000429463 745 ntBASIC16.79■□□□□ 0.28
ATP2A1O14983 AC026320.2-201ENST00000434379 478 ntBASIC16.79■□□□□ 0.28
ATP2A1O14983 OR2R1P-201ENST00000441404 914 ntBASIC16.79■□□□□ 0.28
ATP2A1O14983 RN7SL67P-201ENST00000492147 296 ntBASIC16.79■□□□□ 0.28
ATP2A1O14983 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.79■□□□□ 0.28
ATP2A1O14983 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.79■□□□□ 0.28
ATP2A1O14983 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
ATP2A1O14983 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.79■□□□□ 0.28
ATP2A1O14983 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms