Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC18.71■□□□□ 0.59
CHL1O00533 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.71■□□□□ 0.59
CHL1O00533 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC18.71■□□□□ 0.59
CHL1O00533 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC18.71■□□□□ 0.59
CHL1O00533 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHL1O00533 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CHL1O00533 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHL1O00533 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC18.71■□□□□ 0.59
CHL1O00533 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHL1O00533 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHL1O00533 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHL1O00533 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHL1O00533 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHL1O00533 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CHL1O00533 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHL1O00533 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHL1O00533 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CHL1O00533 RNA5SP359-201ENST00000364838 113 ntBASIC18.71■□□□□ 0.59
CHL1O00533 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHL1O00533 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC18.71■□□□□ 0.59
CHL1O00533 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC18.71■□□□□ 0.59
CHL1O00533 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHL1O00533 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHL1O00533 RN7SL720P-201ENST00000488178 304 ntBASIC18.71■□□□□ 0.59
CHL1O00533 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CHL1O00533 AC116345.2-201ENST00000512837 523 ntBASIC18.71■□□□□ 0.59
CHL1O00533 POU5F1P2-201ENST00000521750 823 ntBASIC18.71■□□□□ 0.59
CHL1O00533 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHL1O00533 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC18.71■□□□□ 0.59
CHL1O00533 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC18.71■□□□□ 0.59
CHL1O00533 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHL1O00533 RHOQP1-201ENST00000555758 579 ntBASIC18.71■□□□□ 0.59
CHL1O00533 AC026803.1-201ENST00000569130 274 ntBASIC18.71■□□□□ 0.59
CHL1O00533 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC18.71■□□□□ 0.59
CHL1O00533 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHL1O00533 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC18.71■□□□□ 0.59
CHL1O00533 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CHL1O00533 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHL1O00533 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CHL1O00533 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.58
CHL1O00533 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHL1O00533 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHL1O00533 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHL1O00533 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.7■□□□□ 0.58
CHL1O00533 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHL1O00533 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHL1O00533 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC18.7■□□□□ 0.58
CHL1O00533 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHL1O00533 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHL1O00533 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CHL1O00533 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHL1O00533 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHL1O00533 PARVG-202ENST00000415224 999 ntTSL 2 BASIC18.7■□□□□ 0.58
CHL1O00533 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC18.7■□□□□ 0.58
CHL1O00533 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC18.7■□□□□ 0.58
CHL1O00533 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHL1O00533 AL353637.1-201ENST00000451571 732 ntBASIC18.7■□□□□ 0.58
CHL1O00533 UPF3AP2-201ENST00000457924 1132 ntBASIC18.7■□□□□ 0.58
CHL1O00533 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC18.7■□□□□ 0.58
CHL1O00533 SUPT4H1P2-201ENST00000501248 353 ntBASIC18.7■□□□□ 0.58
CHL1O00533 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC18.7■□□□□ 0.58
CHL1O00533 PHBP15-201ENST00000574228 665 ntBASIC18.7■□□□□ 0.58
CHL1O00533 AC012617.1-204ENST00000586340 2305 ntBASIC18.7■□□□□ 0.58
CHL1O00533 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC18.7■□□□□ 0.58
CHL1O00533 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CHL1O00533 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHL1O00533 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHL1O00533 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHL1O00533 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CHL1O00533 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHL1O00533 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHL1O00533 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHL1O00533 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CHL1O00533 KRT8P19-201ENST00000551916 1455 ntBASIC18.7■□□□□ 0.58
CHL1O00533 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CHL1O00533 FRMPD2B-201ENST00000431305 1347 ntBASIC18.7■□□□□ 0.58
CHL1O00533 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHL1O00533 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CHL1O00533 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC18.7■□□□□ 0.58
CHL1O00533 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHL1O00533 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC18.69■□□□□ 0.58
CHL1O00533 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHL1O00533 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHL1O00533 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC18.69■□□□□ 0.58
CHL1O00533 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC18.69■□□□□ 0.58
CHL1O00533 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHL1O00533 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHL1O00533 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHL1O00533 BX640514.1-201ENST00000583223 1918 ntBASIC18.69■□□□□ 0.58
CHL1O00533 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHL1O00533 AC007686.3-201ENST00000619017 3487 ntBASIC18.69■□□□□ 0.58
CHL1O00533 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHL1O00533 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHL1O00533 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC18.69■□□□□ 0.58
CHL1O00533 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHL1O00533 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC18.69■□□□□ 0.58
CHL1O00533 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC18.69■□□□□ 0.58
CHL1O00533 RN7SL258P-201ENST00000478664 300 ntBASIC18.69■□□□□ 0.58
CHL1O00533 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC18.69■□□□□ 0.58
CHL1O00533 CD164-210ENST00000512821 964 ntTSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms