Protein–RNA interactions for Protein: A6PVL3

KNCN, Kinocilin, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNCNA6PVL3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
KNCNA6PVL3 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
KNCNA6PVL3 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
KNCNA6PVL3 AL731571.1-201ENST00000617058 5428 ntBASIC11.12□□□□□ -0.63
KNCNA6PVL3 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
KNCNA6PVL3 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
KNCNA6PVL3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
KNCNA6PVL3 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
KNCNA6PVL3 AC020910.5-201ENST00000623668 1865 ntBASIC11.12□□□□□ -0.63
KNCNA6PVL3 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
KNCNA6PVL3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC11.12□□□□□ -0.63
KNCNA6PVL3 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
KNCNA6PVL3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
KNCNA6PVL3 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
KNCNA6PVL3 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC11.12□□□□□ -0.63
KNCNA6PVL3 AC140479.7-201ENST00000636301 2332 ntBASIC11.12□□□□□ -0.63
KNCNA6PVL3 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
KNCNA6PVL3 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
KNCNA6PVL3 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
KNCNA6PVL3 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC11.11□□□□□ -0.63
KNCNA6PVL3 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC11.11□□□□□ -0.63
KNCNA6PVL3 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
KNCNA6PVL3 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
KNCNA6PVL3 AC063926.2-201ENST00000623766 1308 ntBASIC11.11□□□□□ -0.63
KNCNA6PVL3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC11.11□□□□□ -0.63
KNCNA6PVL3 RET-205ENST00000615310 4337 ntTSL 5 BASIC11.11□□□□□ -0.63
KNCNA6PVL3 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
KNCNA6PVL3 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC11.11□□□□□ -0.63
KNCNA6PVL3 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
KNCNA6PVL3 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC11.11□□□□□ -0.63
KNCNA6PVL3 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
KNCNA6PVL3 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
KNCNA6PVL3 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
KNCNA6PVL3 AL354989.2-201ENST00000435838 1540 ntBASIC11.11□□□□□ -0.63
KNCNA6PVL3 AC011840.2-201ENST00000563063 1520 ntBASIC11.11□□□□□ -0.63
KNCNA6PVL3 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
KNCNA6PVL3 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
KNCNA6PVL3 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
KNCNA6PVL3 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
KNCNA6PVL3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
KNCNA6PVL3 AC023908.3-201ENST00000564211 3047 ntBASIC11.11□□□□□ -0.63
KNCNA6PVL3 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
KNCNA6PVL3 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
KNCNA6PVL3 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
KNCNA6PVL3 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
KNCNA6PVL3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
KNCNA6PVL3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
KNCNA6PVL3 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
KNCNA6PVL3 AC112492.5-201ENST00000421897 457 ntBASIC11.11□□□□□ -0.63
KNCNA6PVL3 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC11.11□□□□□ -0.63
KNCNA6PVL3 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC11.11□□□□□ -0.63
KNCNA6PVL3 RNA5SP486-201ENST00000515961 83 ntBASIC11.11□□□□□ -0.63
KNCNA6PVL3 AC078819.1-201ENST00000547454 765 ntBASIC11.11□□□□□ -0.63
KNCNA6PVL3 AC012085.1-201ENST00000548270 765 ntBASIC11.11□□□□□ -0.63
KNCNA6PVL3 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC11.11□□□□□ -0.63
KNCNA6PVL3 RAB43P1-201ENST00000561790 589 ntBASIC11.11□□□□□ -0.63
KNCNA6PVL3 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC11.11□□□□□ -0.63
KNCNA6PVL3 AC138466.3-201ENST00000619983 221 ntBASIC11.11□□□□□ -0.63
KNCNA6PVL3 AC132938.4-201ENST00000623835 848 ntBASIC11.11□□□□□ -0.63
KNCNA6PVL3 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
KNCNA6PVL3 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC11.11□□□□□ -0.63
KNCNA6PVL3 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC11.11□□□□□ -0.63
KNCNA6PVL3 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
KNCNA6PVL3 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC11.11□□□□□ -0.63
KNCNA6PVL3 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
KNCNA6PVL3 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC11.11□□□□□ -0.63
KNCNA6PVL3 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
KNCNA6PVL3 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
KNCNA6PVL3 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
KNCNA6PVL3 AC003102.2-201ENST00000589195 1469 ntBASIC11.11□□□□□ -0.63
KNCNA6PVL3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
KNCNA6PVL3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
KNCNA6PVL3 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
KNCNA6PVL3 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
KNCNA6PVL3 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
KNCNA6PVL3 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
KNCNA6PVL3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC11.11□□□□□ -0.63
KNCNA6PVL3 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC11.11□□□□□ -0.63
KNCNA6PVL3 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC11.11□□□□□ -0.63
KNCNA6PVL3 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
KNCNA6PVL3 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
KNCNA6PVL3 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
KNCNA6PVL3 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
KNCNA6PVL3 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
KNCNA6PVL3 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
KNCNA6PVL3 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
KNCNA6PVL3 INE2-201ENST00000630399 1874 ntBASIC11.1□□□□□ -0.63
KNCNA6PVL3 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC11.1□□□□□ -0.63
KNCNA6PVL3 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
KNCNA6PVL3 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
KNCNA6PVL3 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
KNCNA6PVL3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC11.1□□□□□ -0.63
KNCNA6PVL3 PDIA3P1-201ENST00000471856 1510 ntBASIC11.1□□□□□ -0.63
KNCNA6PVL3 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
KNCNA6PVL3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
KNCNA6PVL3 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
KNCNA6PVL3 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
KNCNA6PVL3 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
KNCNA6PVL3 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
KNCNA6PVL3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms