Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 SDHAP3-202ENST00000515467 728 ntBASIC16.11■□□□□ 0.17
CCDC66A2RUB6 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 AC000095.1-201ENST00000603208 874 ntBASIC16.11■□□□□ 0.17
CCDC66A2RUB6 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 AL138828.2-201ENST00000615812 383 ntBASIC16.11■□□□□ 0.17
CCDC66A2RUB6 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCDC66A2RUB6 MTHFR-210ENST00000641407 2387 ntBASIC16.11■□□□□ 0.17
CCDC66A2RUB6 AC018442.1-201ENST00000421439 2061 ntBASIC16.1■□□□□ 0.17
CCDC66A2RUB6 AC004241.5-201ENST00000623870 2448 ntBASIC16.1■□□□□ 0.17
CCDC66A2RUB6 AC020658.7-201ENST00000624274 2442 ntBASIC16.1■□□□□ 0.17
CCDC66A2RUB6 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 AC018529.2-202ENST00000611482 3087 ntBASIC16.1■□□□□ 0.17
CCDC66A2RUB6 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 HLA-J-203ENST00000494367 1087 ntBASIC16.1■□□□□ 0.17
CCDC66A2RUB6 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 AC027612.4-201ENST00000605371 583 ntBASIC16.1■□□□□ 0.17
CCDC66A2RUB6 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 FTO-214ENST00000636218 2227 ntTSL 5 BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCDC66A2RUB6 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.09■□□□□ 0.17
CCDC66A2RUB6 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms