Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 AC006001.1-201ENST00000325130 474 ntBASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 POM121L8P-201ENST00000417732 1281 ntBASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 FAM8A4P-201ENST00000435433 1213 ntBASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 POM121L9P-203ENST00000441984 1285 ntBASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 AC079316.1-201ENST00000548397 411 ntBASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 AC023310.1-201ENST00000554836 735 ntBASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 OR10B1P-201ENST00000601666 907 ntBASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 AC023090.2-201ENST00000625182 2110 ntBASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RPH3AQ9Y2J0 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.23
RPH3AQ9Y2J0 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.65□□□□□ -0.23
RPH3AQ9Y2J0 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 AC099548.2-209ENST00000480264 625 ntBASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 RHOQP1-201ENST00000555758 579 ntBASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 PTENP1-202ENST00000532280 3996 ntBASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.64□□□□□ -0.23
RPH3AQ9Y2J0 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms