Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.99□□□□□ -0.33
C12orf4Q9NQ89 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
C12orf4Q9NQ89 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
C12orf4Q9NQ89 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
C12orf4Q9NQ89 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
C12orf4Q9NQ89 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C12orf4Q9NQ89 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.99□□□□□ -0.33
C12orf4Q9NQ89 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
C12orf4Q9NQ89 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C12orf4Q9NQ89 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
C12orf4Q9NQ89 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
C12orf4Q9NQ89 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 AC004241.1-201ENST00000547799 3299 ntTSL 5 BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 REXO1L4P-201ENST00000605109 1937 ntBASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 POLD2P1-201ENST00000511220 997 ntBASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 AL079307.3-201ENST00000556114 283 ntBASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 MIR6080-201ENST00000617359 66 ntBASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
C12orf4Q9NQ89 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 AC004461.1-201ENST00000412461 403 ntBASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 AC074338.1-201ENST00000416825 156 ntBASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 AP000344.2-201ENST00000512987 629 ntBASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 AC026150.2-201ENST00000564693 1156 ntBASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 AL121894.2-201ENST00000602977 491 ntBASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 Z97205.2-201ENST00000564697 1639 ntBASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
C12orf4Q9NQ89 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms