Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.33□□□□□ -0.11
TIMMDC1Q9NPL8 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TIMMDC1Q9NPL8 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
TIMMDC1Q9NPL8 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
TIMMDC1Q9NPL8 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
TIMMDC1Q9NPL8 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
TIMMDC1Q9NPL8 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TIMMDC1Q9NPL8 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.33□□□□□ -0.11
TIMMDC1Q9NPL8 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TIMMDC1Q9NPL8 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 AL162274.1-201ENST00000617191 1098 ntBASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 OS9-206ENST00000435406 2346 ntTSL 2 BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 AC130686.1-201ENST00000622936 2466 ntBASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TIMMDC1Q9NPL8 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 C1QBPP1-201ENST00000400117 770 ntBASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 U91328.1-201ENST00000437528 223 ntBASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 VDAC1P7-201ENST00000462417 847 ntBASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 AL359711.2-201ENST00000563105 872 ntBASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 AC120045.2-201ENST00000567334 178 ntBASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 AC106886.1-201ENST00000568660 600 ntBASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 AC010319.3-201ENST00000597028 470 ntBASIC14.32□□□□□ -0.12
TIMMDC1Q9NPL8 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms