Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
GCM1Q9NP62 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
GCM1Q9NP62 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.69□□□□□ -0.38
GCM1Q9NP62 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
GCM1Q9NP62 FP325330.2-201ENST00000624219 5630 ntBASIC12.69□□□□□ -0.38
GCM1Q9NP62 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GCM1Q9NP62 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GCM1Q9NP62 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GCM1Q9NP62 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
GCM1Q9NP62 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
GCM1Q9NP62 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
GCM1Q9NP62 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GCM1Q9NP62 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GCM1Q9NP62 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.69□□□□□ -0.38
GCM1Q9NP62 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
GCM1Q9NP62 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GCM1Q9NP62 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
GCM1Q9NP62 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
GCM1Q9NP62 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GCM1Q9NP62 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
GCM1Q9NP62 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
GCM1Q9NP62 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
GCM1Q9NP62 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
GCM1Q9NP62 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
GCM1Q9NP62 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.69□□□□□ -0.38
GCM1Q9NP62 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC12.69□□□□□ -0.38
GCM1Q9NP62 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.68□□□□□ -0.38
GCM1Q9NP62 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.68□□□□□ -0.38
GCM1Q9NP62 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
GCM1Q9NP62 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.68□□□□□ -0.38
GCM1Q9NP62 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GCM1Q9NP62 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
GCM1Q9NP62 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
GCM1Q9NP62 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.68□□□□□ -0.38
GCM1Q9NP62 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.68□□□□□ -0.38
GCM1Q9NP62 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
GCM1Q9NP62 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GCM1Q9NP62 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
GCM1Q9NP62 FKBP4P6-201ENST00000457486 1332 ntBASIC12.68□□□□□ -0.38
GCM1Q9NP62 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
GCM1Q9NP62 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GCM1Q9NP62 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
GCM1Q9NP62 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
GCM1Q9NP62 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GCM1Q9NP62 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GCM1Q9NP62 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.68□□□□□ -0.38
GCM1Q9NP62 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GCM1Q9NP62 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.68□□□□□ -0.38
GCM1Q9NP62 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
GCM1Q9NP62 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
GCM1Q9NP62 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GCM1Q9NP62 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC12.68□□□□□ -0.38
GCM1Q9NP62 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
GCM1Q9NP62 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
GCM1Q9NP62 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.68□□□□□ -0.38
GCM1Q9NP62 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
GCM1Q9NP62 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
GCM1Q9NP62 AC012183.1-201ENST00000625197 499 ntBASIC12.68□□□□□ -0.38
GCM1Q9NP62 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC12.68□□□□□ -0.38
GCM1Q9NP62 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
GCM1Q9NP62 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.68□□□□□ -0.38
GCM1Q9NP62 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
GCM1Q9NP62 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GCM1Q9NP62 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
GCM1Q9NP62 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
GCM1Q9NP62 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GCM1Q9NP62 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GCM1Q9NP62 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
GCM1Q9NP62 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GCM1Q9NP62 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.67□□□□□ -0.38
GCM1Q9NP62 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.67□□□□□ -0.38
GCM1Q9NP62 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
GCM1Q9NP62 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.67□□□□□ -0.38
GCM1Q9NP62 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.67□□□□□ -0.38
GCM1Q9NP62 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.67□□□□□ -0.38
GCM1Q9NP62 AC007686.3-201ENST00000619017 3487 ntBASIC12.67□□□□□ -0.38
GCM1Q9NP62 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
GCM1Q9NP62 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
GCM1Q9NP62 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
GCM1Q9NP62 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
GCM1Q9NP62 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
GCM1Q9NP62 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GCM1Q9NP62 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GCM1Q9NP62 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.67□□□□□ -0.38
GCM1Q9NP62 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.67□□□□□ -0.38
GCM1Q9NP62 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
GCM1Q9NP62 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
GCM1Q9NP62 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
GCM1Q9NP62 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GCM1Q9NP62 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GCM1Q9NP62 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.67□□□□□ -0.38
GCM1Q9NP62 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
GCM1Q9NP62 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
GCM1Q9NP62 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
GCM1Q9NP62 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
GCM1Q9NP62 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.67□□□□□ -0.38
GCM1Q9NP62 TLE1P1-201ENST00000422965 589 ntBASIC12.67□□□□□ -0.38
GCM1Q9NP62 AC007969.1-201ENST00000433675 447 ntBASIC12.67□□□□□ -0.38
GCM1Q9NP62 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
GCM1Q9NP62 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms