Protein–RNA interactions for Protein: Q9HCU9

BRMS1, Breast cancer metastasis-suppressor 1, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRMS1Q9HCU9 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 AC020910.5-201ENST00000623668 1865 ntBASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 CNN2P8-201ENST00000421872 913 ntBASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 AC234783.1-201ENST00000441761 496 ntBASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 AL391280.1-201ENST00000506969 1062 ntBASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC17.1■□□□□ 0.33
BRMS1Q9HCU9 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
BRMS1Q9HCU9 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
BRMS1Q9HCU9 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BRMS1Q9HCU9 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC17.09■□□□□ 0.33
BRMS1Q9HCU9 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC17.09■□□□□ 0.33
BRMS1Q9HCU9 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BRMS1Q9HCU9 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRMS1Q9HCU9 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRMS1Q9HCU9 ST20-AS1-201ENST00000560255 4223 ntBASIC17.09■□□□□ 0.33
BRMS1Q9HCU9 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
BRMS1Q9HCU9 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.09■□□□□ 0.33
BRMS1Q9HCU9 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRMS1Q9HCU9 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRMS1Q9HCU9 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BRMS1Q9HCU9 RN7SKP175-201ENST00000408472 289 ntBASIC17.09■□□□□ 0.33
BRMS1Q9HCU9 ARSEP1-201ENST00000420443 635 ntBASIC17.09■□□□□ 0.33
BRMS1Q9HCU9 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.09■□□□□ 0.33
BRMS1Q9HCU9 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.09■□□□□ 0.33
BRMS1Q9HCU9 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.09■□□□□ 0.33
BRMS1Q9HCU9 AC078819.1-201ENST00000547454 765 ntBASIC17.09■□□□□ 0.33
BRMS1Q9HCU9 AC012085.1-201ENST00000548270 765 ntBASIC17.09■□□□□ 0.33
BRMS1Q9HCU9 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC17.09■□□□□ 0.33
BRMS1Q9HCU9 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.09■□□□□ 0.33
BRMS1Q9HCU9 AC106886.1-201ENST00000568660 600 ntBASIC17.09■□□□□ 0.33
BRMS1Q9HCU9 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRMS1Q9HCU9 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRMS1Q9HCU9 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BRMS1Q9HCU9 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
BRMS1Q9HCU9 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRMS1Q9HCU9 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRMS1Q9HCU9 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BRMS1Q9HCU9 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRMS1Q9HCU9 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
BRMS1Q9HCU9 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
BRMS1Q9HCU9 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
BRMS1Q9HCU9 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
BRMS1Q9HCU9 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
BRMS1Q9HCU9 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
BRMS1Q9HCU9 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
BRMS1Q9HCU9 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
BRMS1Q9HCU9 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
BRMS1Q9HCU9 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
BRMS1Q9HCU9 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.08■□□□□ 0.33
BRMS1Q9HCU9 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.08■□□□□ 0.33
BRMS1Q9HCU9 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
BRMS1Q9HCU9 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
BRMS1Q9HCU9 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.08■□□□□ 0.33
BRMS1Q9HCU9 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
BRMS1Q9HCU9 INE2-201ENST00000630399 1874 ntBASIC17.08■□□□□ 0.33
BRMS1Q9HCU9 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
BRMS1Q9HCU9 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BRMS1Q9HCU9 AC015802.1-201ENST00000588104 1449 ntBASIC17.08■□□□□ 0.32
BRMS1Q9HCU9 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BRMS1Q9HCU9 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.08■□□□□ 0.32
BRMS1Q9HCU9 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.08■□□□□ 0.32
BRMS1Q9HCU9 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BRMS1Q9HCU9 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.08■□□□□ 0.32
BRMS1Q9HCU9 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.08■□□□□ 0.32
BRMS1Q9HCU9 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BRMS1Q9HCU9 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
BRMS1Q9HCU9 AC005034.1-201ENST00000426657 489 ntBASIC17.08■□□□□ 0.32
BRMS1Q9HCU9 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.08■□□□□ 0.32
BRMS1Q9HCU9 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms