Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 AC015936.2-201ENST00000593177 259 ntBASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 COX11-210ENST00000639671 696 ntBASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FOXP3Q9BZS1 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 ST20-AS1-201ENST00000560255 4223 ntBASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 AL033527.4-201ENST00000641026 673 ntBASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 AC215219.1-201ENST00000400706 1817 ntBASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
FOXP3Q9BZS1 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
FOXP3Q9BZS1 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms