Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 BANF1P3-201ENST00000412556 261 ntBASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 BX088651.3-201ENST00000418155 352 ntBASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 CASP3-205ENST00000517513 964 ntTSL 5 BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 CMC2-224ENST00000630396 481 ntTSL 5 BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CNTNAP3Q9BZ76 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 LINC01144-201ENST00000626198 1710 ntBASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 AHCYP3-201ENST00000420053 1279 ntBASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 TSPY25P-201ENST00000429463 745 ntBASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 KRT8P30-201ENST00000432100 650 ntBASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 SCARNA12-201ENST00000459155 270 ntBASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 RN7SL582P-201ENST00000491078 279 ntBASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 GPX3-202ENST00000517973 612 ntTSL 3 BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 AP002490.2-201ENST00000524791 560 ntBASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 AC068831.5-201ENST00000557387 328 ntBASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 AC124068.2-201ENST00000569473 1109 ntBASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 AC026790.2-201ENST00000606282 430 ntBASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CNTNAP3Q9BZ76 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms