Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 OR2I1P-208ENST00000641137 4948 ntBASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 TSPY16P-201ENST00000449843 468 ntBASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 FADS2-205ENST00000517839 469 ntTSL 3 BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 AC055876.2-201ENST00000531834 546 ntBASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 RRP7BP-205ENST00000566851 833 ntBASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 AC009118.2-201ENST00000613275 655 ntBASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 USP28-214ENST00000545540 3431 ntTSL 2 BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 LINC01230-201ENST00000625222 3017 ntBASIC11.84□□□□□ -0.51
CHRDL1Q9BU40 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC11.83□□□□□ -0.51
CHRDL1Q9BU40 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
CHRDL1Q9BU40 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
CHRDL1Q9BU40 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 LILRP1-201ENST00000444199 1370 ntBASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 AL158070.2-201ENST00000623713 1621 ntBASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 METTL26-204ENST00000397665 558 ntTSL 2 BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 AL353779.1-201ENST00000434793 351 ntBASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 RPL13AP25-201ENST00000484130 612 ntBASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 BRI3BPP1-201ENST00000594224 787 ntBASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 AJ011932.1-201ENST00000621707 465 ntBASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 SF1-209ENST00000433274 2317 ntTSL 2 BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CHRDL1Q9BU40 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms