Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 BX324167.2-201ENST00000623717 3316 ntBASIC9.82□□□□□ -0.84
LITAFQ99732 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LITAFQ99732 AL928654.5-201ENST00000624831 2501 ntBASIC9.82□□□□□ -0.84
LITAFQ99732 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LITAFQ99732 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
LITAFQ99732 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
LITAFQ99732 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LITAFQ99732 AL158070.2-201ENST00000623713 1621 ntBASIC9.82□□□□□ -0.84
LITAFQ99732 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
LITAFQ99732 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
LITAFQ99732 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LITAFQ99732 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC9.81□□□□□ -0.84
LITAFQ99732 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
LITAFQ99732 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
LITAFQ99732 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LITAFQ99732 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
LITAFQ99732 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC9.81□□□□□ -0.84
LITAFQ99732 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
LITAFQ99732 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC9.81□□□□□ -0.84
LITAFQ99732 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
LITAFQ99732 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
LITAFQ99732 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
LITAFQ99732 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC9.81□□□□□ -0.84
LITAFQ99732 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LITAFQ99732 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
LITAFQ99732 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
LITAFQ99732 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LITAFQ99732 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC9.81□□□□□ -0.84
LITAFQ99732 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC9.81□□□□□ -0.84
LITAFQ99732 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LITAFQ99732 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC9.81□□□□□ -0.84
LITAFQ99732 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC9.81□□□□□ -0.84
LITAFQ99732 GAPDHP40-201ENST00000505218 1006 ntBASIC9.81□□□□□ -0.84
LITAFQ99732 AC079776.4-201ENST00000511039 504 ntBASIC9.81□□□□□ -0.84
LITAFQ99732 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC9.81□□□□□ -0.84
LITAFQ99732 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC9.81□□□□□ -0.84
LITAFQ99732 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC9.81□□□□□ -0.84
LITAFQ99732 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC9.81□□□□□ -0.84
LITAFQ99732 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC9.81□□□□□ -0.84
LITAFQ99732 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC9.81□□□□□ -0.84
LITAFQ99732 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LITAFQ99732 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LITAFQ99732 AC004623.1-201ENST00000624592 2127 ntBASIC9.81□□□□□ -0.84
LITAFQ99732 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC9.81□□□□□ -0.84
LITAFQ99732 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
LITAFQ99732 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC9.81□□□□□ -0.84
LITAFQ99732 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LITAFQ99732 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC9.81□□□□□ -0.84
LITAFQ99732 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LITAFQ99732 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LITAFQ99732 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LITAFQ99732 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC9.81□□□□□ -0.84
LITAFQ99732 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC9.81□□□□□ -0.84
LITAFQ99732 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
LITAFQ99732 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
LITAFQ99732 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC9.81□□□□□ -0.84
LITAFQ99732 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC9.81□□□□□ -0.84
LITAFQ99732 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
LITAFQ99732 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LITAFQ99732 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LITAFQ99732 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
LITAFQ99732 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
LITAFQ99732 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC9.81□□□□□ -0.84
LITAFQ99732 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LITAFQ99732 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LITAFQ99732 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LITAFQ99732 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
LITAFQ99732 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
LITAFQ99732 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
LITAFQ99732 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
LITAFQ99732 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 FTO-214ENST00000636218 2227 ntTSL 5 BASIC9.8□□□□□ -0.84
LITAFQ99732 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC9.8□□□□□ -0.84
LITAFQ99732 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
LITAFQ99732 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
LITAFQ99732 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
LITAFQ99732 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 AC005014.1-201ENST00000432006 2976 ntBASIC9.8□□□□□ -0.84
LITAFQ99732 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
LITAFQ99732 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC9.8□□□□□ -0.84
LITAFQ99732 RPS19-201ENST00000221975 500 ntTSL 3 BASIC9.8□□□□□ -0.84
LITAFQ99732 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
LITAFQ99732 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
LITAFQ99732 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms