Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
NDNQ99608 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDNQ99608 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDNQ99608 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDNQ99608 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDNQ99608 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NDNQ99608 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NDNQ99608 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.9□□□□□ -0.02
NDNQ99608 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDNQ99608 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NDNQ99608 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NDNQ99608 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDNQ99608 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDNQ99608 MSTO2P-201ENST00000314835 1709 ntBASIC14.9□□□□□ -0.02
NDNQ99608 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
NDNQ99608 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NDNQ99608 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDNQ99608 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NDNQ99608 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDNQ99608 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.9□□□□□ -0.02
NDNQ99608 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.9□□□□□ -0.02
NDNQ99608 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDNQ99608 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.9□□□□□ -0.02
NDNQ99608 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.9□□□□□ -0.02
NDNQ99608 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.9□□□□□ -0.02
NDNQ99608 AC140912.1-201ENST00000577171 1054 ntBASIC14.9□□□□□ -0.02
NDNQ99608 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
NDNQ99608 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
NDNQ99608 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
NDNQ99608 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDNQ99608 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDNQ99608 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDNQ99608 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
NDNQ99608 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NDNQ99608 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDNQ99608 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NDNQ99608 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDNQ99608 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDNQ99608 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDNQ99608 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NDNQ99608 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDNQ99608 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDNQ99608 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.9□□□□□ -0.02
NDNQ99608 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDNQ99608 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
NDNQ99608 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
NDNQ99608 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NDNQ99608 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
NDNQ99608 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
NDNQ99608 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NDNQ99608 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NDNQ99608 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NDNQ99608 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NDNQ99608 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NDNQ99608 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NDNQ99608 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.89□□□□□ -0.03
NDNQ99608 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NDNQ99608 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NDNQ99608 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NDNQ99608 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.89□□□□□ -0.03
NDNQ99608 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NDNQ99608 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NDNQ99608 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NDNQ99608 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.89□□□□□ -0.03
NDNQ99608 PIN1P1-201ENST00000412108 996 ntBASIC14.89□□□□□ -0.03
NDNQ99608 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.89□□□□□ -0.03
NDNQ99608 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NDNQ99608 AC093433.1-201ENST00000458048 571 ntBASIC14.89□□□□□ -0.03
NDNQ99608 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NDNQ99608 GIMAP3P-201ENST00000495150 836 ntBASIC14.89□□□□□ -0.03
NDNQ99608 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.89□□□□□ -0.03
NDNQ99608 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.89□□□□□ -0.03
NDNQ99608 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.89□□□□□ -0.03
NDNQ99608 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
NDNQ99608 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NDNQ99608 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NDNQ99608 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.89□□□□□ -0.03
NDNQ99608 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NDNQ99608 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NDNQ99608 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
NDNQ99608 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NDNQ99608 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NDNQ99608 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NDNQ99608 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NDNQ99608 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NDNQ99608 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NDNQ99608 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NDNQ99608 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
NDNQ99608 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NDNQ99608 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NDNQ99608 KRT8P35-201ENST00000483942 1338 ntBASIC14.89□□□□□ -0.03
NDNQ99608 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
NDNQ99608 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.89□□□□□ -0.03
NDNQ99608 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NDNQ99608 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NDNQ99608 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
NDNQ99608 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NDNQ99608 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NDNQ99608 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NDNQ99608 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms