Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 NHP2-202ENST00000314397 599 ntTSL 2 BASIC17.72■□□□□ 0.43
CRAMP1Q96RY5 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CRAMP1Q96RY5 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC17.72■□□□□ 0.43
CRAMP1Q96RY5 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CRAMP1Q96RY5 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC17.72■□□□□ 0.43
CRAMP1Q96RY5 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CRAMP1Q96RY5 PPIA-208ENST00000489459 907 ntTSL 2 BASIC17.72■□□□□ 0.43
CRAMP1Q96RY5 AC093909.3-201ENST00000504783 336 ntBASIC17.72■□□□□ 0.43
CRAMP1Q96RY5 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC17.72■□□□□ 0.43
CRAMP1Q96RY5 AC095040.1-201ENST00000513286 675 ntBASIC17.72■□□□□ 0.43
CRAMP1Q96RY5 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC17.72■□□□□ 0.43
CRAMP1Q96RY5 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC17.72■□□□□ 0.43
CRAMP1Q96RY5 AC226150.1-201ENST00000544259 466 ntBASIC17.72■□□□□ 0.43
CRAMP1Q96RY5 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC17.72■□□□□ 0.43
CRAMP1Q96RY5 AC011247.3-201ENST00000603297 438 ntBASIC17.72■□□□□ 0.43
CRAMP1Q96RY5 PPIA-210ENST00000620047 827 ntTSL 5 BASIC17.72■□□□□ 0.43
CRAMP1Q96RY5 AC011471.3-201ENST00000623576 402 ntBASIC17.72■□□□□ 0.43
CRAMP1Q96RY5 LINC00244-201ENST00000625073 613 ntBASIC17.72■□□□□ 0.43
CRAMP1Q96RY5 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC17.72■□□□□ 0.43
CRAMP1Q96RY5 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CRAMP1Q96RY5 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.72■□□□□ 0.43
CRAMP1Q96RY5 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.72■□□□□ 0.43
CRAMP1Q96RY5 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
CRAMP1Q96RY5 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CRAMP1Q96RY5 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.72■□□□□ 0.43
CRAMP1Q96RY5 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CRAMP1Q96RY5 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
CRAMP1Q96RY5 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC17.72■□□□□ 0.43
CRAMP1Q96RY5 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CRAMP1Q96RY5 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CRAMP1Q96RY5 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CRAMP1Q96RY5 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CRAMP1Q96RY5 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CRAMP1Q96RY5 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CRAMP1Q96RY5 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CRAMP1Q96RY5 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
CRAMP1Q96RY5 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CRAMP1Q96RY5 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.71■□□□□ 0.43
CRAMP1Q96RY5 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.71■□□□□ 0.43
CRAMP1Q96RY5 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CRAMP1Q96RY5 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CRAMP1Q96RY5 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CRAMP1Q96RY5 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CRAMP1Q96RY5 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC17.71■□□□□ 0.43
CRAMP1Q96RY5 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC17.71■□□□□ 0.43
CRAMP1Q96RY5 AL161932.2-201ENST00000435436 679 ntBASIC17.71■□□□□ 0.43
CRAMP1Q96RY5 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC17.71■□□□□ 0.43
CRAMP1Q96RY5 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CRAMP1Q96RY5 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC17.71■□□□□ 0.43
CRAMP1Q96RY5 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CRAMP1Q96RY5 SORD2P-201ENST00000558556 1069 ntBASIC17.71■□□□□ 0.43
CRAMP1Q96RY5 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.71■□□□□ 0.43
CRAMP1Q96RY5 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC17.71■□□□□ 0.43
CRAMP1Q96RY5 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CRAMP1Q96RY5 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.71■□□□□ 0.43
CRAMP1Q96RY5 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
CRAMP1Q96RY5 AC018442.1-201ENST00000421439 2061 ntBASIC17.71■□□□□ 0.43
CRAMP1Q96RY5 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CRAMP1Q96RY5 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CRAMP1Q96RY5 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.71■□□□□ 0.43
CRAMP1Q96RY5 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CRAMP1Q96RY5 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CRAMP1Q96RY5 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CRAMP1Q96RY5 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.42
CRAMP1Q96RY5 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CRAMP1Q96RY5 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
CRAMP1Q96RY5 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CRAMP1Q96RY5 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CRAMP1Q96RY5 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CRAMP1Q96RY5 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CRAMP1Q96RY5 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CRAMP1Q96RY5 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.7■□□□□ 0.42
CRAMP1Q96RY5 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CRAMP1Q96RY5 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CRAMP1Q96RY5 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC17.7■□□□□ 0.42
CRAMP1Q96RY5 IDS-203ENST00000428056 1213 ntTSL 2 BASIC17.7■□□□□ 0.42
CRAMP1Q96RY5 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC17.7■□□□□ 0.42
CRAMP1Q96RY5 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC17.7■□□□□ 0.42
CRAMP1Q96RY5 AL135901.1-201ENST00000451812 333 ntBASIC17.7■□□□□ 0.42
CRAMP1Q96RY5 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CRAMP1Q96RY5 AC093826.1-201ENST00000508655 993 ntBASIC17.7■□□□□ 0.42
CRAMP1Q96RY5 RNA5SP406-201ENST00000516106 112 ntBASIC17.7■□□□□ 0.42
CRAMP1Q96RY5 NAA40-205ENST00000539656 577 ntTSL 4 BASIC17.7■□□□□ 0.42
CRAMP1Q96RY5 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC17.7■□□□□ 0.42
CRAMP1Q96RY5 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC17.7■□□□□ 0.42
CRAMP1Q96RY5 RN7SL596P-201ENST00000582123 288 ntBASIC17.7■□□□□ 0.42
CRAMP1Q96RY5 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC17.7■□□□□ 0.42
CRAMP1Q96RY5 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CRAMP1Q96RY5 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CRAMP1Q96RY5 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CRAMP1Q96RY5 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC17.7■□□□□ 0.42
CRAMP1Q96RY5 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CRAMP1Q96RY5 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.7■□□□□ 0.42
CRAMP1Q96RY5 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.7■□□□□ 0.42
CRAMP1Q96RY5 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CRAMP1Q96RY5 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CRAMP1Q96RY5 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.7■□□□□ 0.42
CRAMP1Q96RY5 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC17.7■□□□□ 0.42
CRAMP1Q96RY5 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CRAMP1Q96RY5 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms