Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 GPR158-201ENST00000376351 6959 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 LVRN-202ENST00000395528 4544 ntTSL 5 BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 TMPO-212ENST00000556029 4242 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 AC092135.3-201ENST00000624151 1846 ntBASIC11.26□□□□□ -0.61
AP1S3Q96PC3 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 DZIP1-201ENST00000347108 7068 ntAPPRIS P4 TSL 5 BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 FAM95B1-212ENST00000592873 4692 ntBASIC11.26□□□□□ -0.61
AP1S3Q96PC3 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 RNA5SP416-201ENST00000516838 111 ntBASIC11.26□□□□□ -0.61
AP1S3Q96PC3 PENK-208ENST00000523051 772 ntTSL 5 BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 AC145285.3-201ENST00000564603 959 ntBASIC11.26□□□□□ -0.61
AP1S3Q96PC3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 SCN5A-209ENST00000451551 8343 ntTSL 5 BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 BX640514.1-201ENST00000583223 1918 ntBASIC11.26□□□□□ -0.61
AP1S3Q96PC3 CCDC144A-206ENST00000399273 8686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 KRIT1-201ENST00000340022 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 HECTD4-202ENST00000377560 15759 ntAPPRIS P5 TSL 5 BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
AP1S3Q96PC3 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 AP3S2-201ENST00000336418 5891 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 IKZF4-201ENST00000262032 5229 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 CARD14-209ENST00000573882 4537 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 AC020912.1-201ENST00000638312 5059 ntTSL 5 BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 AL353705.2-201ENST00000428243 662 ntBASIC11.25□□□□□ -0.61
AP1S3Q96PC3 SPDYE11-202ENST00000450699 704 ntBASIC11.25□□□□□ -0.61
AP1S3Q96PC3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 KRT8P23-201ENST00000560090 1207 ntBASIC11.25□□□□□ -0.61
AP1S3Q96PC3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 AC106730.1-201ENST00000566722 1090 ntBASIC11.25□□□□□ -0.61
AP1S3Q96PC3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC11.25□□□□□ -0.61
AP1S3Q96PC3 SPDYE9P-201ENST00000570642 692 ntBASIC11.25□□□□□ -0.61
AP1S3Q96PC3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC11.25□□□□□ -0.61
AP1S3Q96PC3 SPDYE10P-202ENST00000612005 668 ntBASIC11.25□□□□□ -0.61
AP1S3Q96PC3 SPDYE8P-202ENST00000612377 668 ntBASIC11.25□□□□□ -0.61
AP1S3Q96PC3 AC091812.2-201ENST00000619081 385 ntBASIC11.25□□□□□ -0.61
AP1S3Q96PC3 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 224.9 ms