Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 AC015688.4-201ENST00000580780 1647 ntBASIC15.21■□□□□ 0.03
RPRD1AQ96P16 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.21■□□□□ 0.03
RPRD1AQ96P16 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 AC007663.3-201ENST00000609632 465 ntBASIC15.21■□□□□ 0.03
RPRD1AQ96P16 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 AL008638.5-201ENST00000623814 1298 ntBASIC15.21■□□□□ 0.03
RPRD1AQ96P16 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RPRD1AQ96P16 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.21■□□□□ 0.02
RPRD1AQ96P16 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RPRD1AQ96P16 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RPRD1AQ96P16 AC067750.1-201ENST00000608826 6545 ntBASIC15.21■□□□□ 0.02
RPRD1AQ96P16 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RPRD1AQ96P16 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RPRD1AQ96P16 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.21■□□□□ 0.02
RPRD1AQ96P16 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.2■□□□□ 0.02
RPRD1AQ96P16 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 MIR4783-201ENST00000580343 82 ntBASIC15.2■□□□□ 0.02
RPRD1AQ96P16 AC243960.2-201ENST00000600996 747 ntBASIC15.2■□□□□ 0.02
RPRD1AQ96P16 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 AL162426.1-201ENST00000624141 743 ntBASIC15.2■□□□□ 0.02
RPRD1AQ96P16 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RPRD1AQ96P16 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms