Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.11□□□□□ -0.31
APH1AQ96BI3 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.11□□□□□ -0.31
APH1AQ96BI3 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.11□□□□□ -0.31
APH1AQ96BI3 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APH1AQ96BI3 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.11□□□□□ -0.31
APH1AQ96BI3 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
APH1AQ96BI3 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.11□□□□□ -0.31
APH1AQ96BI3 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.11□□□□□ -0.31
APH1AQ96BI3 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APH1AQ96BI3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
APH1AQ96BI3 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APH1AQ96BI3 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
APH1AQ96BI3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APH1AQ96BI3 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.11□□□□□ -0.31
APH1AQ96BI3 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APH1AQ96BI3 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APH1AQ96BI3 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
APH1AQ96BI3 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
APH1AQ96BI3 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
APH1AQ96BI3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.11□□□□□ -0.31
APH1AQ96BI3 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.11□□□□□ -0.31
APH1AQ96BI3 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
APH1AQ96BI3 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APH1AQ96BI3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
APH1AQ96BI3 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APH1AQ96BI3 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APH1AQ96BI3 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.1□□□□□ -0.31
APH1AQ96BI3 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APH1AQ96BI3 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APH1AQ96BI3 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APH1AQ96BI3 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
APH1AQ96BI3 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APH1AQ96BI3 AC010141.1-201ENST00000411585 623 ntBASIC13.1□□□□□ -0.31
APH1AQ96BI3 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.1□□□□□ -0.31
APH1AQ96BI3 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.1□□□□□ -0.31
APH1AQ96BI3 ACTBP11-201ENST00000436287 1126 ntBASIC13.1□□□□□ -0.31
APH1AQ96BI3 HSPB1P2-201ENST00000448722 546 ntBASIC13.1□□□□□ -0.31
APH1AQ96BI3 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APH1AQ96BI3 AL035414.1-201ENST00000451327 857 ntBASIC13.1□□□□□ -0.31
APH1AQ96BI3 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APH1AQ96BI3 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.1□□□□□ -0.31
APH1AQ96BI3 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.1□□□□□ -0.31
APH1AQ96BI3 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.1□□□□□ -0.31
APH1AQ96BI3 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.1□□□□□ -0.31
APH1AQ96BI3 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
APH1AQ96BI3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APH1AQ96BI3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.1□□□□□ -0.31
APH1AQ96BI3 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.1□□□□□ -0.31
APH1AQ96BI3 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.1□□□□□ -0.31
APH1AQ96BI3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
APH1AQ96BI3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APH1AQ96BI3 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APH1AQ96BI3 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.1□□□□□ -0.31
APH1AQ96BI3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APH1AQ96BI3 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APH1AQ96BI3 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
APH1AQ96BI3 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
APH1AQ96BI3 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APH1AQ96BI3 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APH1AQ96BI3 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
APH1AQ96BI3 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
APH1AQ96BI3 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APH1AQ96BI3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APH1AQ96BI3 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APH1AQ96BI3 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
APH1AQ96BI3 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APH1AQ96BI3 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APH1AQ96BI3 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APH1AQ96BI3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APH1AQ96BI3 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APH1AQ96BI3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
APH1AQ96BI3 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
APH1AQ96BI3 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
APH1AQ96BI3 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
APH1AQ96BI3 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
APH1AQ96BI3 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.09□□□□□ -0.31
APH1AQ96BI3 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APH1AQ96BI3 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APH1AQ96BI3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.09□□□□□ -0.31
APH1AQ96BI3 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
APH1AQ96BI3 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.09□□□□□ -0.31
APH1AQ96BI3 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
APH1AQ96BI3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APH1AQ96BI3 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
APH1AQ96BI3 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.09□□□□□ -0.31
APH1AQ96BI3 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APH1AQ96BI3 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.09□□□□□ -0.31
APH1AQ96BI3 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APH1AQ96BI3 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.09□□□□□ -0.31
APH1AQ96BI3 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APH1AQ96BI3 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
APH1AQ96BI3 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APH1AQ96BI3 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
APH1AQ96BI3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.09□□□□□ -0.31
APH1AQ96BI3 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APH1AQ96BI3 MIR1908-201ENST00000410394 80 ntBASIC13.09□□□□□ -0.31
APH1AQ96BI3 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.09□□□□□ -0.31
APH1AQ96BI3 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
APH1AQ96BI3 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.09□□□□□ -0.31
APH1AQ96BI3 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms