Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.25□□□□□ -0.13
CLHC1Q8NHS4 AC008494.3-201ENST00000606615 944 ntBASIC14.25□□□□□ -0.13
CLHC1Q8NHS4 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLHC1Q8NHS4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.25□□□□□ -0.13
CLHC1Q8NHS4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLHC1Q8NHS4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.25□□□□□ -0.13
CLHC1Q8NHS4 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLHC1Q8NHS4 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CLHC1Q8NHS4 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLHC1Q8NHS4 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CLHC1Q8NHS4 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.25□□□□□ -0.13
CLHC1Q8NHS4 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CLHC1Q8NHS4 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLHC1Q8NHS4 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLHC1Q8NHS4 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CLHC1Q8NHS4 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CLHC1Q8NHS4 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CLHC1Q8NHS4 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLHC1Q8NHS4 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLHC1Q8NHS4 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 CICP16-201ENST00000502609 2813 ntBASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 MST1P2-201ENST00000457982 2291 ntBASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 MIR770-201ENST00000390219 98 ntBASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 FO681548.1-201ENST00000455617 1132 ntBASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 AC138761.1-201ENST00000584393 385 ntBASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 CTBP2P3-201ENST00000585629 1255 ntBASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
CLHC1Q8NHS4 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 AC027796.2-201ENST00000575326 344 ntBASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 CLUHP6-201ENST00000580789 941 ntBASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 TMEM261P1-201ENST00000604899 340 ntBASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 AP005019.2-201ENST00000615104 511 ntBASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CLHC1Q8NHS4 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms