Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SYNE4Q8N205 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SYNE4Q8N205 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SYNE4Q8N205 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC18.15■□□□□ 0.5
SYNE4Q8N205 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SYNE4Q8N205 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
SYNE4Q8N205 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC18.15■□□□□ 0.5
SYNE4Q8N205 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC18.15■□□□□ 0.5
SYNE4Q8N205 DUTP3-201ENST00000450025 415 ntBASIC18.15■□□□□ 0.5
SYNE4Q8N205 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC18.15■□□□□ 0.5
SYNE4Q8N205 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SYNE4Q8N205 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SYNE4Q8N205 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SYNE4Q8N205 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
SYNE4Q8N205 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC18.15■□□□□ 0.5
SYNE4Q8N205 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC18.15■□□□□ 0.5
SYNE4Q8N205 AC007326.1-201ENST00000604539 458 ntBASIC18.15■□□□□ 0.5
SYNE4Q8N205 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC18.15■□□□□ 0.5
SYNE4Q8N205 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SYNE4Q8N205 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
SYNE4Q8N205 AC126177.1-201ENST00000547829 2218 ntBASIC18.15■□□□□ 0.5
SYNE4Q8N205 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SYNE4Q8N205 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SYNE4Q8N205 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SYNE4Q8N205 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC18.15■□□□□ 0.5
SYNE4Q8N205 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
SYNE4Q8N205 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SYNE4Q8N205 AC023157.3-201ENST00000619086 2088 ntBASIC18.14■□□□□ 0.5
SYNE4Q8N205 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SYNE4Q8N205 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SYNE4Q8N205 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SYNE4Q8N205 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SYNE4Q8N205 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SYNE4Q8N205 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SYNE4Q8N205 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.14■□□□□ 0.49
SYNE4Q8N205 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.14■□□□□ 0.49
SYNE4Q8N205 KRT17P5-201ENST00000332088 839 ntBASIC18.14■□□□□ 0.49
SYNE4Q8N205 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC18.14■□□□□ 0.49
SYNE4Q8N205 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SYNE4Q8N205 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SYNE4Q8N205 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC18.14■□□□□ 0.49
SYNE4Q8N205 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC18.14■□□□□ 0.49
SYNE4Q8N205 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SYNE4Q8N205 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SYNE4Q8N205 AC092580.1-201ENST00000433998 658 ntBASIC18.14■□□□□ 0.49
SYNE4Q8N205 AL627422.1-201ENST00000434104 580 ntBASIC18.14■□□□□ 0.49
SYNE4Q8N205 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC18.14■□□□□ 0.49
SYNE4Q8N205 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC18.14■□□□□ 0.49
SYNE4Q8N205 RN7SL277P-201ENST00000481521 288 ntBASIC18.14■□□□□ 0.49
SYNE4Q8N205 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC18.14■□□□□ 0.49
SYNE4Q8N205 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC18.14■□□□□ 0.49
SYNE4Q8N205 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC18.14■□□□□ 0.49
SYNE4Q8N205 AC025262.2-201ENST00000623975 1056 ntBASIC18.14■□□□□ 0.49
SYNE4Q8N205 AC127024.7-201ENST00000625101 200 ntBASIC18.14■□□□□ 0.49
SYNE4Q8N205 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SYNE4Q8N205 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SYNE4Q8N205 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SYNE4Q8N205 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SYNE4Q8N205 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
SYNE4Q8N205 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SYNE4Q8N205 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC18.14■□□□□ 0.49
SYNE4Q8N205 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC18.14■□□□□ 0.49
SYNE4Q8N205 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SYNE4Q8N205 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SYNE4Q8N205 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SYNE4Q8N205 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SYNE4Q8N205 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC18.14■□□□□ 0.49
SYNE4Q8N205 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC18.13■□□□□ 0.49
SYNE4Q8N205 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC18.13■□□□□ 0.49
SYNE4Q8N205 MTHFR-210ENST00000641407 2387 ntBASIC18.13■□□□□ 0.49
SYNE4Q8N205 HLA-DQB1-202ENST00000399079 1501 ntBASIC18.13■□□□□ 0.49
SYNE4Q8N205 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SYNE4Q8N205 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SYNE4Q8N205 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SYNE4Q8N205 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SYNE4Q8N205 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SYNE4Q8N205 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SYNE4Q8N205 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SYNE4Q8N205 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SYNE4Q8N205 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC18.13■□□□□ 0.49
SYNE4Q8N205 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.13■□□□□ 0.49
SYNE4Q8N205 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SYNE4Q8N205 JTB-202ENST00000356648 1040 ntTSL 2 BASIC18.13■□□□□ 0.49
SYNE4Q8N205 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SYNE4Q8N205 GAS5-209ENST00000430245 723 ntTSL 3 BASIC18.13■□□□□ 0.49
SYNE4Q8N205 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC18.13■□□□□ 0.49
SYNE4Q8N205 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC18.13■□□□□ 0.49
SYNE4Q8N205 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC18.13■□□□□ 0.49
SYNE4Q8N205 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SYNE4Q8N205 FTH1P22-201ENST00000456305 520 ntBASIC18.13■□□□□ 0.49
SYNE4Q8N205 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC18.13■□□□□ 0.49
SYNE4Q8N205 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC18.13■□□□□ 0.49
SYNE4Q8N205 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SYNE4Q8N205 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SYNE4Q8N205 AC141586.1-203ENST00000567242 366 ntBASIC18.13■□□□□ 0.49
SYNE4Q8N205 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SYNE4Q8N205 MIR6858-201ENST00000620733 67 ntBASIC18.13■□□□□ 0.49
SYNE4Q8N205 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.13■□□□□ 0.49
SYNE4Q8N205 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SYNE4Q8N205 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms