Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
XRN1Q8IZH2 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
XRN1Q8IZH2 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC19.74■□□□□ 0.75
XRN1Q8IZH2 URAHP-205ENST00000610227 398 ntBASIC19.74■□□□□ 0.75
XRN1Q8IZH2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
XRN1Q8IZH2 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.74■□□□□ 0.75
XRN1Q8IZH2 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
XRN1Q8IZH2 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.74■□□□□ 0.75
XRN1Q8IZH2 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
XRN1Q8IZH2 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
XRN1Q8IZH2 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
XRN1Q8IZH2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
XRN1Q8IZH2 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
XRN1Q8IZH2 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
XRN1Q8IZH2 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
XRN1Q8IZH2 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
XRN1Q8IZH2 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
XRN1Q8IZH2 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
XRN1Q8IZH2 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
XRN1Q8IZH2 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
XRN1Q8IZH2 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
XRN1Q8IZH2 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
XRN1Q8IZH2 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
XRN1Q8IZH2 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.74■□□□□ 0.75
XRN1Q8IZH2 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 SIRPB3P-201ENST00000340424 1216 ntBASIC19.73■□□□□ 0.75
XRN1Q8IZH2 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 HLA-DMA-202ENST00000395303 1007 ntBASIC19.73■□□□□ 0.75
XRN1Q8IZH2 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 SERBP1P2-201ENST00000436888 1164 ntBASIC19.73■□□□□ 0.75
XRN1Q8IZH2 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 MIR4746-201ENST00000579802 71 ntBASIC19.73■□□□□ 0.75
XRN1Q8IZH2 AC015909.5-201ENST00000624336 2266 ntBASIC19.73■□□□□ 0.75
XRN1Q8IZH2 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 AC215219.1-201ENST00000400706 1817 ntBASIC19.73■□□□□ 0.75
XRN1Q8IZH2 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 AC007952.5-201ENST00000572818 1486 ntBASIC19.73■□□□□ 0.75
XRN1Q8IZH2 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 SSR4-202ENST00000370085 526 ntTSL 2 BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 OR2W2P-201ENST00000406313 909 ntBASIC19.73■□□□□ 0.75
XRN1Q8IZH2 NALT1-202ENST00000450304 437 ntTSL 3 BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 RN7SL351P-201ENST00000469306 248 ntBASIC19.73■□□□□ 0.75
XRN1Q8IZH2 EMC4-208ENST00000559078 599 ntTSL 3 BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 DUT-208ENST00000559540 1441 ntTSL 2 BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 MIR6074-201ENST00000612054 107 ntBASIC19.73■□□□□ 0.75
XRN1Q8IZH2 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
XRN1Q8IZH2 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
XRN1Q8IZH2 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
XRN1Q8IZH2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
XRN1Q8IZH2 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC19.72■□□□□ 0.75
XRN1Q8IZH2 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
XRN1Q8IZH2 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
XRN1Q8IZH2 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
XRN1Q8IZH2 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
XRN1Q8IZH2 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
XRN1Q8IZH2 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
XRN1Q8IZH2 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
XRN1Q8IZH2 PARN-202ENST00000420015 2360 ntTSL 2 BASIC19.72■□□□□ 0.75
XRN1Q8IZH2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
XRN1Q8IZH2 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
XRN1Q8IZH2 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
XRN1Q8IZH2 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
XRN1Q8IZH2 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC19.72■□□□□ 0.75
XRN1Q8IZH2 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC19.72■□□□□ 0.75
XRN1Q8IZH2 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
XRN1Q8IZH2 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC19.72■□□□□ 0.75
XRN1Q8IZH2 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC19.72■□□□□ 0.75
XRN1Q8IZH2 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
XRN1Q8IZH2 AC232323.1-201ENST00000540724 2099 ntBASIC19.72■□□□□ 0.75
XRN1Q8IZH2 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
XRN1Q8IZH2 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC19.72■□□□□ 0.75
XRN1Q8IZH2 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
XRN1Q8IZH2 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms