Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RTTNQ86VV8 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RTTNQ86VV8 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RTTNQ86VV8 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RTTNQ86VV8 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
RTTNQ86VV8 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RTTNQ86VV8 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.15□□□□□ -0.3
RTTNQ86VV8 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RTTNQ86VV8 AC232323.1-201ENST00000540724 2099 ntBASIC13.15□□□□□ -0.3
RTTNQ86VV8 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RTTNQ86VV8 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
RTTNQ86VV8 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RTTNQ86VV8 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RTTNQ86VV8 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
RTTNQ86VV8 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RTTNQ86VV8 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.15□□□□□ -0.3
RTTNQ86VV8 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RTTNQ86VV8 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RTTNQ86VV8 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RTTNQ86VV8 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
RTTNQ86VV8 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
RTTNQ86VV8 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
RTTNQ86VV8 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.15□□□□□ -0.31
RTTNQ86VV8 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.15□□□□□ -0.31
RTTNQ86VV8 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.31
RTTNQ86VV8 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.15□□□□□ -0.31
RTTNQ86VV8 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.15□□□□□ -0.31
RTTNQ86VV8 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.15□□□□□ -0.31
RTTNQ86VV8 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
RTTNQ86VV8 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.15□□□□□ -0.31
RTTNQ86VV8 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
RTTNQ86VV8 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC13.15□□□□□ -0.31
RTTNQ86VV8 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RTTNQ86VV8 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTTNQ86VV8 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RTTNQ86VV8 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTTNQ86VV8 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
RTTNQ86VV8 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTTNQ86VV8 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
RTTNQ86VV8 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTTNQ86VV8 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTTNQ86VV8 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTTNQ86VV8 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.14□□□□□ -0.31
RTTNQ86VV8 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
RTTNQ86VV8 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTTNQ86VV8 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTTNQ86VV8 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
RTTNQ86VV8 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RTTNQ86VV8 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.14□□□□□ -0.31
RTTNQ86VV8 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RTTNQ86VV8 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
RTTNQ86VV8 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTTNQ86VV8 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RTTNQ86VV8 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTTNQ86VV8 ACKR1-201ENST00000368121 1240 ntBASIC13.14□□□□□ -0.31
RTTNQ86VV8 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTTNQ86VV8 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RTTNQ86VV8 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.14□□□□□ -0.31
RTTNQ86VV8 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.14□□□□□ -0.31
RTTNQ86VV8 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTTNQ86VV8 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.14□□□□□ -0.31
RTTNQ86VV8 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.14□□□□□ -0.31
RTTNQ86VV8 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTTNQ86VV8 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.14□□□□□ -0.31
RTTNQ86VV8 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTTNQ86VV8 AL513477.1-201ENST00000602865 2407 ntBASIC13.14□□□□□ -0.31
RTTNQ86VV8 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.14□□□□□ -0.31
RTTNQ86VV8 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
RTTNQ86VV8 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
RTTNQ86VV8 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RTTNQ86VV8 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RTTNQ86VV8 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
RTTNQ86VV8 AC006058.4-201ENST00000624016 1670 ntBASIC13.14□□□□□ -0.31
RTTNQ86VV8 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.14□□□□□ -0.31
RTTNQ86VV8 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTTNQ86VV8 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTTNQ86VV8 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RTTNQ86VV8 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTTNQ86VV8 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RTTNQ86VV8 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTTNQ86VV8 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTTNQ86VV8 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RTTNQ86VV8 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
RTTNQ86VV8 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
RTTNQ86VV8 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
RTTNQ86VV8 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
RTTNQ86VV8 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.13□□□□□ -0.31
RTTNQ86VV8 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.13□□□□□ -0.31
RTTNQ86VV8 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC13.13□□□□□ -0.31
RTTNQ86VV8 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RTTNQ86VV8 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.13□□□□□ -0.31
RTTNQ86VV8 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms