Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LRRTM4Q86VH4 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 AL157407.1-201ENST00000435784 904 ntBASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 KRT8P13-201ENST00000463294 1010 ntBASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 AC106794.1-201ENST00000506935 792 ntBASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 AC005324.6-201ENST00000587972 613 ntBASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 AC022748.3-201ENST00000621828 275 ntBASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 AC009093.10-201ENST00000641956 1442 ntBASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
LRRTM4Q86VH4 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LRRTM4Q86VH4 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LRRTM4Q86VH4 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LRRTM4Q86VH4 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.46□□□□□ -0.1
LRRTM4Q86VH4 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LRRTM4Q86VH4 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LRRTM4Q86VH4 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LRRTM4Q86VH4 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LRRTM4Q86VH4 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LRRTM4Q86VH4 KRT8P28-201ENST00000433288 1390 ntBASIC14.46□□□□□ -0.1
LRRTM4Q86VH4 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.46□□□□□ -0.1
LRRTM4Q86VH4 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM4Q86VH4 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM4Q86VH4 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.45□□□□□ -0.1
LRRTM4Q86VH4 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
LRRTM4Q86VH4 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM4Q86VH4 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM4Q86VH4 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.45□□□□□ -0.1
LRRTM4Q86VH4 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM4Q86VH4 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LRRTM4Q86VH4 KHSRPP1-201ENST00000427983 1768 ntBASIC14.45□□□□□ -0.1
LRRTM4Q86VH4 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM4Q86VH4 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM4Q86VH4 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM4Q86VH4 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM4Q86VH4 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM4Q86VH4 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM4Q86VH4 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.45□□□□□ -0.1
LRRTM4Q86VH4 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM4Q86VH4 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM4Q86VH4 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM4Q86VH4 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM4Q86VH4 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
LRRTM4Q86VH4 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM4Q86VH4 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM4Q86VH4 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRRTM4Q86VH4 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms