Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.81□□□□□ -0.2
REEP3Q6NUK4 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 UGT1A2P-201ENST00000454886 866 ntBASIC13.8□□□□□ -0.2
REEP3Q6NUK4 AC022137.2-201ENST00000503482 481 ntBASIC13.8□□□□□ -0.2
REEP3Q6NUK4 SERBP1P5-201ENST00000510079 1181 ntBASIC13.8□□□□□ -0.2
REEP3Q6NUK4 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 CHCHD2P3-201ENST00000603038 451 ntBASIC13.8□□□□□ -0.2
REEP3Q6NUK4 AC004233.3-201ENST00000607794 1269 ntBASIC13.8□□□□□ -0.2
REEP3Q6NUK4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
REEP3Q6NUK4 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
REEP3Q6NUK4 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.79□□□□□ -0.2
REEP3Q6NUK4 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
REEP3Q6NUK4 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
REEP3Q6NUK4 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
REEP3Q6NUK4 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
REEP3Q6NUK4 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
REEP3Q6NUK4 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
REEP3Q6NUK4 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.79□□□□□ -0.2
REEP3Q6NUK4 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.79□□□□□ -0.2
REEP3Q6NUK4 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
REEP3Q6NUK4 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
REEP3Q6NUK4 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.79□□□□□ -0.2
REEP3Q6NUK4 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
REEP3Q6NUK4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
REEP3Q6NUK4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
REEP3Q6NUK4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
REEP3Q6NUK4 RN7SKP230-201ENST00000365642 335 ntBASIC13.79□□□□□ -0.2
REEP3Q6NUK4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.79□□□□□ -0.2
REEP3Q6NUK4 AC009486.1-201ENST00000569860 813 ntBASIC13.79□□□□□ -0.2
REEP3Q6NUK4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
REEP3Q6NUK4 CU634019.7-201ENST00000624153 1185 ntBASIC13.79□□□□□ -0.2
REEP3Q6NUK4 FP236241.2-201ENST00000624906 1185 ntBASIC13.79□□□□□ -0.2
REEP3Q6NUK4 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
REEP3Q6NUK4 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
REEP3Q6NUK4 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
REEP3Q6NUK4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.79□□□□□ -0.2
REEP3Q6NUK4 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
REEP3Q6NUK4 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
REEP3Q6NUK4 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.79□□□□□ -0.2
REEP3Q6NUK4 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
REEP3Q6NUK4 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
REEP3Q6NUK4 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.79□□□□□ -0.2
REEP3Q6NUK4 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.78□□□□□ -0.2
REEP3Q6NUK4 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
REEP3Q6NUK4 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
REEP3Q6NUK4 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
REEP3Q6NUK4 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.78□□□□□ -0.2
REEP3Q6NUK4 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
REEP3Q6NUK4 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
REEP3Q6NUK4 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
REEP3Q6NUK4 AC011498.7-201ENST00000624986 2027 ntBASIC13.78□□□□□ -0.2
REEP3Q6NUK4 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
REEP3Q6NUK4 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
REEP3Q6NUK4 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.78□□□□□ -0.2
REEP3Q6NUK4 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
REEP3Q6NUK4 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
REEP3Q6NUK4 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
REEP3Q6NUK4 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms