Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 AL512599.1-201ENST00000430724 685 ntBASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 AL512310.5-201ENST00000551999 515 ntBASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 AC126755.5-201ENST00000622756 267 ntBASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 TEKT4P2-202ENST00000559466 1312 ntBASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 AC078814.4-201ENST00000546650 327 ntBASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 AL009176.1-201ENST00000607876 650 ntBASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
VPS13DQ5THJ4 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 AL136084.1-201ENST00000449172 318 ntBASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 GNG10P1-201ENST00000452289 199 ntBASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 KRT8P34-201ENST00000577607 1044 ntBASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 AC110057.1-201ENST00000636031 898 ntBASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 DUT-208ENST00000559540 1441 ntTSL 2 BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 MIR1301-201ENST00000408518 82 ntBASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 MIR4326-201ENST00000582203 59 ntBASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 USP35-204ENST00000530267 2419 ntTSL 2 BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 PSAT1P2-201ENST00000426107 972 ntBASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 RN7SL128P-201ENST00000467883 305 ntBASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 CTBP2P6-201ENST00000526402 1229 ntBASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 MYB-242ENST00000618728 3545 ntTSL 5 BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 GOLGA6L16P-201ENST00000441780 1299 ntBASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 SLC25A15P3-201ENST00000505530 290 ntBASIC9.54□□□□□ -0.88
VPS13DQ5THJ4 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC9.54□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms