Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.16□□□□□ -0.3
EFNB1P98172 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNB1P98172 PUDPP3-201ENST00000445368 636 ntBASIC13.16□□□□□ -0.3
EFNB1P98172 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.16□□□□□ -0.3
EFNB1P98172 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.16□□□□□ -0.3
EFNB1P98172 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
EFNB1P98172 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.16□□□□□ -0.3
EFNB1P98172 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.16□□□□□ -0.3
EFNB1P98172 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.16□□□□□ -0.3
EFNB1P98172 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.16□□□□□ -0.3
EFNB1P98172 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
EFNB1P98172 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
EFNB1P98172 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.16□□□□□ -0.3
EFNB1P98172 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.16□□□□□ -0.3
EFNB1P98172 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNB1P98172 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
EFNB1P98172 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNB1P98172 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNB1P98172 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNB1P98172 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.16□□□□□ -0.3
EFNB1P98172 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.16□□□□□ -0.3
EFNB1P98172 SLC7A15P-201ENST00000424028 1363 ntBASIC13.16□□□□□ -0.3
EFNB1P98172 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.16□□□□□ -0.3
EFNB1P98172 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.16□□□□□ -0.3
EFNB1P98172 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.16□□□□□ -0.3
EFNB1P98172 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNB1P98172 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNB1P98172 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNB1P98172 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNB1P98172 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
EFNB1P98172 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.16□□□□□ -0.3
EFNB1P98172 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNB1P98172 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNB1P98172 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.16□□□□□ -0.3
EFNB1P98172 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
EFNB1P98172 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
EFNB1P98172 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.15□□□□□ -0.3
EFNB1P98172 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.15□□□□□ -0.3
EFNB1P98172 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
EFNB1P98172 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
EFNB1P98172 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
EFNB1P98172 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
EFNB1P98172 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
EFNB1P98172 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
EFNB1P98172 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
EFNB1P98172 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
EFNB1P98172 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
EFNB1P98172 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
EFNB1P98172 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
EFNB1P98172 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
EFNB1P98172 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.15□□□□□ -0.3
EFNB1P98172 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
EFNB1P98172 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
EFNB1P98172 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
EFNB1P98172 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
EFNB1P98172 GNAQP1-201ENST00000444815 1067 ntBASIC13.15□□□□□ -0.3
EFNB1P98172 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.15□□□□□ -0.3
EFNB1P98172 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.15□□□□□ -0.3
EFNB1P98172 IGHV3-42-201ENST00000520410 361 ntBASIC13.15□□□□□ -0.3
EFNB1P98172 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
EFNB1P98172 CLUHP6-201ENST00000580789 941 ntBASIC13.15□□□□□ -0.3
EFNB1P98172 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
EFNB1P98172 AL390754.1-201ENST00000619088 582 ntBASIC13.15□□□□□ -0.3
EFNB1P98172 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.15□□□□□ -0.3
EFNB1P98172 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
EFNB1P98172 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
EFNB1P98172 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
EFNB1P98172 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
EFNB1P98172 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
EFNB1P98172 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.15□□□□□ -0.3
EFNB1P98172 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.15□□□□□ -0.3
EFNB1P98172 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
EFNB1P98172 AL365209.1-201ENST00000624418 6473 ntBASIC13.15□□□□□ -0.3
EFNB1P98172 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
EFNB1P98172 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.15□□□□□ -0.3
EFNB1P98172 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
EFNB1P98172 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.15□□□□□ -0.3
EFNB1P98172 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
EFNB1P98172 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.15□□□□□ -0.3
EFNB1P98172 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
EFNB1P98172 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
EFNB1P98172 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
EFNB1P98172 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
EFNB1P98172 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.15□□□□□ -0.31
EFNB1P98172 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
EFNB1P98172 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
EFNB1P98172 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.15□□□□□ -0.31
EFNB1P98172 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.14□□□□□ -0.31
EFNB1P98172 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.14□□□□□ -0.31
EFNB1P98172 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
EFNB1P98172 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
EFNB1P98172 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
EFNB1P98172 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
EFNB1P98172 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.14□□□□□ -0.31
EFNB1P98172 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.14□□□□□ -0.31
EFNB1P98172 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
EFNB1P98172 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
EFNB1P98172 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
EFNB1P98172 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
EFNB1P98172 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 262.7 ms