Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.22□□□□□ -0.29
H3F3AP84243 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.22□□□□□ -0.29
H3F3AP84243 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.22□□□□□ -0.29
H3F3AP84243 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.22□□□□□ -0.29
H3F3AP84243 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.22□□□□□ -0.29
H3F3AP84243 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.22□□□□□ -0.29
H3F3AP84243 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H3F3AP84243 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H3F3AP84243 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
H3F3AP84243 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
H3F3AP84243 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H3F3AP84243 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H3F3AP84243 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H3F3AP84243 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H3F3AP84243 MYADML-201ENST00000474610 2147 ntBASIC13.22□□□□□ -0.29
H3F3AP84243 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H3F3AP84243 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H3F3AP84243 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H3F3AP84243 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H3F3AP84243 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H3F3AP84243 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
H3F3AP84243 KHSRPP1-201ENST00000427983 1768 ntBASIC13.22□□□□□ -0.29
H3F3AP84243 SHC1P1-201ENST00000425230 1745 ntBASIC13.22□□□□□ -0.29
H3F3AP84243 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.22□□□□□ -0.29
H3F3AP84243 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H3F3AP84243 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
H3F3AP84243 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
H3F3AP84243 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
H3F3AP84243 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
H3F3AP84243 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H3F3AP84243 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
H3F3AP84243 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H3F3AP84243 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
H3F3AP84243 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
H3F3AP84243 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.21□□□□□ -0.29
H3F3AP84243 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.21□□□□□ -0.29
H3F3AP84243 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
H3F3AP84243 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.21□□□□□ -0.29
H3F3AP84243 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H3F3AP84243 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
H3F3AP84243 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.21□□□□□ -0.29
H3F3AP84243 FAM21FP-201ENST00000426241 1131 ntBASIC13.21□□□□□ -0.29
H3F3AP84243 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
H3F3AP84243 AL035414.1-201ENST00000451327 857 ntBASIC13.21□□□□□ -0.29
H3F3AP84243 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
H3F3AP84243 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.21□□□□□ -0.29
H3F3AP84243 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.21□□□□□ -0.29
H3F3AP84243 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.21□□□□□ -0.29
H3F3AP84243 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
H3F3AP84243 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.21□□□□□ -0.29
H3F3AP84243 AL583810.1-201ENST00000553344 1045 ntBASIC13.21□□□□□ -0.29
H3F3AP84243 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.21□□□□□ -0.29
H3F3AP84243 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.21□□□□□ -0.29
H3F3AP84243 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
H3F3AP84243 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.21□□□□□ -0.29
H3F3AP84243 AL359881.2-201ENST00000602973 570 ntBASIC13.21□□□□□ -0.29
H3F3AP84243 AC244157.2-201ENST00000616239 1006 ntBASIC13.21□□□□□ -0.29
H3F3AP84243 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
H3F3AP84243 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.21□□□□□ -0.29
H3F3AP84243 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H3F3AP84243 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H3F3AP84243 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
H3F3AP84243 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
H3F3AP84243 AC087386.2-201ENST00000623212 4637 ntBASIC13.21□□□□□ -0.3
H3F3AP84243 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
H3F3AP84243 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.21□□□□□ -0.3
H3F3AP84243 AC005912.2-201ENST00000619492 2400 ntBASIC13.21□□□□□ -0.3
H3F3AP84243 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
H3F3AP84243 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
H3F3AP84243 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
H3F3AP84243 AC015802.1-201ENST00000588104 1449 ntBASIC13.21□□□□□ -0.3
H3F3AP84243 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.21□□□□□ -0.3
H3F3AP84243 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
H3F3AP84243 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.3
H3F3AP84243 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
H3F3AP84243 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
H3F3AP84243 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
H3F3AP84243 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3AP84243 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3AP84243 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3AP84243 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3AP84243 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
H3F3AP84243 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3AP84243 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.2□□□□□ -0.3
H3F3AP84243 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3AP84243 AC006504.5-208ENST00000588784 2401 ntBASIC13.2□□□□□ -0.3
H3F3AP84243 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
H3F3AP84243 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3AP84243 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3AP84243 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3AP84243 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.2□□□□□ -0.3
H3F3AP84243 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.2□□□□□ -0.3
H3F3AP84243 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3AP84243 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
H3F3AP84243 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.2□□□□□ -0.3
H3F3AP84243 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
H3F3AP84243 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.2□□□□□ -0.3
H3F3AP84243 AC079178.1-201ENST00000420915 656 ntBASIC13.2□□□□□ -0.3
H3F3AP84243 BNIP3P42-201ENST00000454982 569 ntBASIC13.2□□□□□ -0.3
H3F3AP84243 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 211.1 ms