Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
AP1S1P61966 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.83□□□□□ -0.04
AP1S1P61966 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S1P61966 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
AP1S1P61966 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP1S1P61966 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
AP1S1P61966 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.82□□□□□ -0.04
AP1S1P61966 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
AP1S1P61966 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.82□□□□□ -0.04
AP1S1P61966 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S1P61966 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
AP1S1P61966 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S1P61966 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S1P61966 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
AP1S1P61966 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
AP1S1P61966 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
AP1S1P61966 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
AP1S1P61966 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.82□□□□□ -0.04
AP1S1P61966 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S1P61966 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S1P61966 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S1P61966 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
AP1S1P61966 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
AP1S1P61966 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S1P61966 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S1P61966 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.82□□□□□ -0.04
AP1S1P61966 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S1P61966 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.82□□□□□ -0.04
AP1S1P61966 KLF2P1-201ENST00000447438 1042 ntBASIC14.82□□□□□ -0.04
AP1S1P61966 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.82□□□□□ -0.04
AP1S1P61966 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.82□□□□□ -0.04
AP1S1P61966 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.82□□□□□ -0.04
AP1S1P61966 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
AP1S1P61966 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.82□□□□□ -0.04
AP1S1P61966 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.82□□□□□ -0.04
AP1S1P61966 AC005324.6-201ENST00000587972 613 ntBASIC14.82□□□□□ -0.04
AP1S1P61966 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S1P61966 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.82□□□□□ -0.04
AP1S1P61966 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.82□□□□□ -0.04
AP1S1P61966 Z98259.2-201ENST00000641583 609 ntBASIC14.82□□□□□ -0.04
AP1S1P61966 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S1P61966 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.82□□□□□ -0.04
AP1S1P61966 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
AP1S1P61966 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S1P61966 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S1P61966 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.82□□□□□ -0.04
AP1S1P61966 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S1P61966 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
AP1S1P61966 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.82□□□□□ -0.04
AP1S1P61966 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S1P61966 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S1P61966 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S1P61966 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S1P61966 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S1P61966 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S1P61966 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.82□□□□□ -0.04
AP1S1P61966 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
AP1S1P61966 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S1P61966 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
AP1S1P61966 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S1P61966 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.81□□□□□ -0.04
AP1S1P61966 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S1P61966 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S1P61966 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
AP1S1P61966 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.81□□□□□ -0.04
AP1S1P61966 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S1P61966 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S1P61966 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.81□□□□□ -0.04
AP1S1P61966 AC099063.4-201ENST00000641099 1602 ntBASIC14.81□□□□□ -0.04
AP1S1P61966 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S1P61966 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
AP1S1P61966 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.81□□□□□ -0.04
AP1S1P61966 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S1P61966 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
AP1S1P61966 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S1P61966 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S1P61966 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S1P61966 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S1P61966 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S1P61966 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S1P61966 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S1P61966 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
AP1S1P61966 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S1P61966 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
AP1S1P61966 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S1P61966 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S1P61966 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.81□□□□□ -0.04
AP1S1P61966 AC004898.1-201ENST00000451057 766 ntBASIC14.81□□□□□ -0.04
AP1S1P61966 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
AP1S1P61966 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.81□□□□□ -0.04
AP1S1P61966 AC126915.1-201ENST00000522847 1038 ntBASIC14.81□□□□□ -0.04
AP1S1P61966 RBM8B-201ENST00000555532 525 ntBASIC14.81□□□□□ -0.04
AP1S1P61966 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
AP1S1P61966 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.81□□□□□ -0.04
AP1S1P61966 SORD2P-201ENST00000558556 1069 ntBASIC14.81□□□□□ -0.04
AP1S1P61966 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.81□□□□□ -0.04
AP1S1P61966 BNIP3P13-201ENST00000599968 566 ntBASIC14.81□□□□□ -0.04
AP1S1P61966 AL022328.3-201ENST00000607943 679 ntBASIC14.81□□□□□ -0.04
AP1S1P61966 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
AP1S1P61966 AP000346.4-201ENST00000614827 381 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms