Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC12.13□□□□□ -0.47
SPCS3P61009 METTL23-205ENST00000588302 925 ntTSL 5 BASIC12.13□□□□□ -0.47
SPCS3P61009 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.13□□□□□ -0.47
SPCS3P61009 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SPCS3P61009 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SPCS3P61009 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SPCS3P61009 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SPCS3P61009 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.13□□□□□ -0.47
SPCS3P61009 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC12.13□□□□□ -0.47
SPCS3P61009 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SPCS3P61009 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
SPCS3P61009 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
SPCS3P61009 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SPCS3P61009 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SPCS3P61009 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
SPCS3P61009 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SPCS3P61009 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
SPCS3P61009 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SPCS3P61009 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SPCS3P61009 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.13□□□□□ -0.47
SPCS3P61009 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.13□□□□□ -0.47
SPCS3P61009 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SPCS3P61009 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SPCS3P61009 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SPCS3P61009 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
SPCS3P61009 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SPCS3P61009 AL137783.1-201ENST00000623494 1896 ntBASIC12.12□□□□□ -0.47
SPCS3P61009 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SPCS3P61009 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.12□□□□□ -0.47
SPCS3P61009 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.12□□□□□ -0.47
SPCS3P61009 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.12□□□□□ -0.47
SPCS3P61009 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.12□□□□□ -0.47
SPCS3P61009 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SPCS3P61009 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.12□□□□□ -0.47
SPCS3P61009 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
SPCS3P61009 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SPCS3P61009 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
SPCS3P61009 AC145098.2-201ENST00000623593 3026 ntBASIC12.12□□□□□ -0.47
SPCS3P61009 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SPCS3P61009 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SPCS3P61009 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SPCS3P61009 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.12□□□□□ -0.47
SPCS3P61009 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.12□□□□□ -0.47
SPCS3P61009 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SPCS3P61009 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SPCS3P61009 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
SPCS3P61009 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SPCS3P61009 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SPCS3P61009 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SPCS3P61009 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
SPCS3P61009 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.12□□□□□ -0.47
SPCS3P61009 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SPCS3P61009 GAPDHP40-201ENST00000505218 1006 ntBASIC12.12□□□□□ -0.47
SPCS3P61009 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.12□□□□□ -0.47
SPCS3P61009 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.12□□□□□ -0.47
SPCS3P61009 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.12□□□□□ -0.47
SPCS3P61009 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.12□□□□□ -0.47
SPCS3P61009 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.12□□□□□ -0.47
SPCS3P61009 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SPCS3P61009 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.12□□□□□ -0.47
SPCS3P61009 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.12□□□□□ -0.47
SPCS3P61009 AC073592.8-201ENST00000624126 511 ntBASIC12.12□□□□□ -0.47
SPCS3P61009 AC023090.2-201ENST00000625182 2110 ntBASIC12.12□□□□□ -0.47
SPCS3P61009 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SPCS3P61009 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.12□□□□□ -0.47
SPCS3P61009 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SPCS3P61009 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.12□□□□□ -0.47
SPCS3P61009 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.12□□□□□ -0.47
SPCS3P61009 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SPCS3P61009 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
SPCS3P61009 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.12□□□□□ -0.47
SPCS3P61009 AC011474.4-201ENST00000623523 2076 ntBASIC12.12□□□□□ -0.47
SPCS3P61009 MST1P2-201ENST00000457982 2291 ntBASIC12.12□□□□□ -0.47
SPCS3P61009 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SPCS3P61009 LPO-204ENST00000543544 2350 ntTSL 2 BASIC12.12□□□□□ -0.47
SPCS3P61009 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SPCS3P61009 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.12□□□□□ -0.47
SPCS3P61009 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
SPCS3P61009 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.12□□□□□ -0.47
SPCS3P61009 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SPCS3P61009 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SPCS3P61009 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SPCS3P61009 AC093525.8-201ENST00000624099 1342 ntBASIC12.11□□□□□ -0.47
SPCS3P61009 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SPCS3P61009 KRT8P22-201ENST00000562317 1415 ntBASIC12.11□□□□□ -0.47
SPCS3P61009 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPCS3P61009 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SPCS3P61009 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
SPCS3P61009 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPCS3P61009 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.11□□□□□ -0.47
SPCS3P61009 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.11□□□□□ -0.47
SPCS3P61009 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.11□□□□□ -0.47
SPCS3P61009 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPCS3P61009 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
SPCS3P61009 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SPCS3P61009 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SPCS3P61009 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SPCS3P61009 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SPCS3P61009 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SPCS3P61009 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms