Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S2P59780 AC072061.1-201ENST00000569710 2234 ntBASIC12.73□□□□□ -0.37
AP3S2P59780 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S2P59780 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S2P59780 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
AP3S2P59780 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
AP3S2P59780 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S2P59780 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S2P59780 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S2P59780 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.73□□□□□ -0.37
AP3S2P59780 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S2P59780 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S2P59780 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S2P59780 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S2P59780 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S2P59780 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S2P59780 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S2P59780 AL355306.1-201ENST00000415580 579 ntBASIC12.73□□□□□ -0.37
AP3S2P59780 AL671277.1-201ENST00000429656 993 ntBASIC12.73□□□□□ -0.37
AP3S2P59780 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S2P59780 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S2P59780 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.73□□□□□ -0.37
AP3S2P59780 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC12.73□□□□□ -0.37
AP3S2P59780 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S2P59780 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.73□□□□□ -0.37
AP3S2P59780 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC12.73□□□□□ -0.37
AP3S2P59780 INO80E-210ENST00000567705 880 ntTSL 3 BASIC12.73□□□□□ -0.37
AP3S2P59780 PRKN-208ENST00000610470 531 ntTSL 2 BASIC12.73□□□□□ -0.37
AP3S2P59780 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
AP3S2P59780 PRKN-209ENST00000612485 225 ntTSL 5 BASIC12.73□□□□□ -0.37
AP3S2P59780 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S2P59780 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S2P59780 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S2P59780 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S2P59780 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.73□□□□□ -0.37
AP3S2P59780 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.73□□□□□ -0.37
AP3S2P59780 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S2P59780 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S2P59780 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S2P59780 AL023775.1-201ENST00000454907 1746 ntBASIC12.73□□□□□ -0.37
AP3S2P59780 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S2P59780 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S2P59780 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
AP3S2P59780 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S2P59780 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S2P59780 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP3S2P59780 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.72□□□□□ -0.37
AP3S2P59780 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
AP3S2P59780 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.72□□□□□ -0.37
AP3S2P59780 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC12.72□□□□□ -0.37
AP3S2P59780 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S2P59780 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.72□□□□□ -0.37
AP3S2P59780 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
AP3S2P59780 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S2P59780 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S2P59780 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.72□□□□□ -0.37
AP3S2P59780 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S2P59780 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.72□□□□□ -0.37
AP3S2P59780 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S2P59780 PCDHB18P-202ENST00000526308 3197 ntBASIC12.72□□□□□ -0.37
AP3S2P59780 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S2P59780 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.72□□□□□ -0.37
AP3S2P59780 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.72□□□□□ -0.37
AP3S2P59780 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S2P59780 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.72□□□□□ -0.37
AP3S2P59780 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S2P59780 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S2P59780 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S2P59780 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.72□□□□□ -0.37
AP3S2P59780 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.72□□□□□ -0.37
AP3S2P59780 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S2P59780 AC015922.1-201ENST00000421102 1152 ntBASIC12.72□□□□□ -0.37
AP3S2P59780 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.72□□□□□ -0.37
AP3S2P59780 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.72□□□□□ -0.37
AP3S2P59780 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.72□□□□□ -0.37
AP3S2P59780 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC12.72□□□□□ -0.37
AP3S2P59780 AC079776.4-201ENST00000511039 504 ntBASIC12.72□□□□□ -0.37
AP3S2P59780 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.72□□□□□ -0.37
AP3S2P59780 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.72□□□□□ -0.37
AP3S2P59780 PDPK2P-202ENST00000562415 1191 ntBASIC12.72□□□□□ -0.37
AP3S2P59780 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.72□□□□□ -0.37
AP3S2P59780 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
AP3S2P59780 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.72□□□□□ -0.37
AP3S2P59780 TBCB-205ENST00000585746 875 ntTSL 3 BASIC12.72□□□□□ -0.37
AP3S2P59780 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
AP3S2P59780 AC092364.2-202ENST00000597012 1073 ntBASIC12.72□□□□□ -0.37
AP3S2P59780 AC066615.1-201ENST00000640911 628 ntBASIC12.72□□□□□ -0.37
AP3S2P59780 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
AP3S2P59780 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S2P59780 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
AP3S2P59780 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
AP3S2P59780 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
AP3S2P59780 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.72□□□□□ -0.37
AP3S2P59780 AL365181.3-201ENST00000605886 3222 ntBASIC12.72□□□□□ -0.37
AP3S2P59780 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.72□□□□□ -0.37
AP3S2P59780 AL157414.3-201ENST00000624276 1954 ntBASIC12.72□□□□□ -0.37
AP3S2P59780 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.72□□□□□ -0.37
AP3S2P59780 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
AP3S2P59780 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.72□□□□□ -0.37
AP3S2P59780 AL121723.1-201ENST00000445194 1519 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms