Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GFRA1P56159 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
GFRA1P56159 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.18□□□□□ -0.3
GFRA1P56159 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
GFRA1P56159 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.18□□□□□ -0.3
GFRA1P56159 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
GFRA1P56159 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
GFRA1P56159 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GFRA1P56159 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
GFRA1P56159 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
GFRA1P56159 MYADML-201ENST00000474610 2147 ntBASIC13.18□□□□□ -0.3
GFRA1P56159 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GFRA1P56159 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
GFRA1P56159 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
GFRA1P56159 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
GFRA1P56159 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GFRA1P56159 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GFRA1P56159 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.17□□□□□ -0.3
GFRA1P56159 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.17□□□□□ -0.3
GFRA1P56159 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GFRA1P56159 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GFRA1P56159 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GFRA1P56159 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.17□□□□□ -0.3
GFRA1P56159 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.17□□□□□ -0.3
GFRA1P56159 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GFRA1P56159 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GFRA1P56159 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GFRA1P56159 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
GFRA1P56159 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.17□□□□□ -0.3
GFRA1P56159 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GFRA1P56159 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
GFRA1P56159 CICP24-201ENST00000605464 2705 ntBASIC13.17□□□□□ -0.3
GFRA1P56159 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GFRA1P56159 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.17□□□□□ -0.3
GFRA1P56159 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GFRA1P56159 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
GFRA1P56159 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GFRA1P56159 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GFRA1P56159 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GFRA1P56159 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GFRA1P56159 BCYRN1-201ENST00000418539 200 ntBASIC13.17□□□□□ -0.3
GFRA1P56159 AC078875.1-201ENST00000431907 724 ntBASIC13.17□□□□□ -0.3
GFRA1P56159 AC005077.2-201ENST00000449786 690 ntBASIC13.17□□□□□ -0.3
GFRA1P56159 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.17□□□□□ -0.3
GFRA1P56159 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.17□□□□□ -0.3
GFRA1P56159 ADM-202ENST00000524948 584 ntTSL 2 BASIC13.17□□□□□ -0.3
GFRA1P56159 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.17□□□□□ -0.3
GFRA1P56159 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.17□□□□□ -0.3
GFRA1P56159 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.17□□□□□ -0.3
GFRA1P56159 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.17□□□□□ -0.3
GFRA1P56159 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GFRA1P56159 AL365209.1-201ENST00000624418 6473 ntBASIC13.17□□□□□ -0.3
GFRA1P56159 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
GFRA1P56159 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.17□□□□□ -0.3
GFRA1P56159 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
GFRA1P56159 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
GFRA1P56159 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GFRA1P56159 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GFRA1P56159 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
GFRA1P56159 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
GFRA1P56159 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.17□□□□□ -0.3
GFRA1P56159 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
GFRA1P56159 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.17□□□□□ -0.3
GFRA1P56159 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
GFRA1P56159 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
GFRA1P56159 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
GFRA1P56159 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
GFRA1P56159 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.16□□□□□ -0.3
GFRA1P56159 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GFRA1P56159 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
GFRA1P56159 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GFRA1P56159 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GFRA1P56159 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.16□□□□□ -0.3
GFRA1P56159 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GFRA1P56159 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GFRA1P56159 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.16□□□□□ -0.3
GFRA1P56159 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
GFRA1P56159 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GFRA1P56159 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GFRA1P56159 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
GFRA1P56159 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.16□□□□□ -0.3
GFRA1P56159 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.16□□□□□ -0.3
GFRA1P56159 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.16□□□□□ -0.3
GFRA1P56159 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.16□□□□□ -0.3
GFRA1P56159 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
GFRA1P56159 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
GFRA1P56159 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.16□□□□□ -0.3
GFRA1P56159 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.16□□□□□ -0.3
GFRA1P56159 AC027237.1-201ENST00000560942 655 ntBASIC13.16□□□□□ -0.3
GFRA1P56159 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
GFRA1P56159 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.16□□□□□ -0.3
GFRA1P56159 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
GFRA1P56159 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GFRA1P56159 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
GFRA1P56159 AC079416.2-201ENST00000625035 1193 ntBASIC13.16□□□□□ -0.3
GFRA1P56159 AL805961.1-203ENST00000641078 1258 ntBASIC13.16□□□□□ -0.3
GFRA1P56159 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GFRA1P56159 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GFRA1P56159 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
GFRA1P56159 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms