Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
CDH13P55290 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH13P55290 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH13P55290 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH13P55290 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.5□□□□□ -0.09
CDH13P55290 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH13P55290 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH13P55290 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH13P55290 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH13P55290 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH13P55290 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH13P55290 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH13P55290 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH13P55290 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH13P55290 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CDH13P55290 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH13P55290 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH13P55290 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CDH13P55290 AC015688.4-201ENST00000580780 1647 ntBASIC14.49□□□□□ -0.09
CDH13P55290 KRT8P35-201ENST00000483942 1338 ntBASIC14.49□□□□□ -0.09
CDH13P55290 MRPL37P1-201ENST00000592451 1337 ntBASIC14.49□□□□□ -0.09
CDH13P55290 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH13P55290 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH13P55290 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH13P55290 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH13P55290 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH13P55290 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH13P55290 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH13P55290 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH13P55290 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH13P55290 MIR661-201ENST00000384842 89 ntBASIC14.49□□□□□ -0.09
CDH13P55290 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH13P55290 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH13P55290 AC087499.6-201ENST00000411576 835 ntBASIC14.49□□□□□ -0.09
CDH13P55290 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH13P55290 AC093433.1-201ENST00000458048 571 ntBASIC14.49□□□□□ -0.09
CDH13P55290 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH13P55290 API5-211ENST00000534695 560 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH13P55290 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH13P55290 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
CDH13P55290 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.49□□□□□ -0.09
CDH13P55290 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH13P55290 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH13P55290 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH13P55290 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH13P55290 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH13P55290 AC008494.3-201ENST00000606615 944 ntBASIC14.49□□□□□ -0.09
CDH13P55290 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.49□□□□□ -0.09
CDH13P55290 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH13P55290 AC215219.1-201ENST00000400706 1817 ntBASIC14.49□□□□□ -0.09
CDH13P55290 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH13P55290 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH13P55290 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH13P55290 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH13P55290 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH13P55290 AC011498.7-201ENST00000624986 2027 ntBASIC14.49□□□□□ -0.09
CDH13P55290 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CDH13P55290 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH13P55290 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH13P55290 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH13P55290 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH13P55290 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CDH13P55290 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH13P55290 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH13P55290 AL138725.1-201ENST00000407347 1314 ntBASIC14.48□□□□□ -0.09
CDH13P55290 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH13P55290 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH13P55290 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH13P55290 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH13P55290 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CDH13P55290 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH13P55290 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CDH13P55290 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
CDH13P55290 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH13P55290 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH13P55290 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH13P55290 ACKR1-201ENST00000368121 1240 ntBASIC14.48□□□□□ -0.09
CDH13P55290 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH13P55290 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH13P55290 MIR770-201ENST00000390219 98 ntBASIC14.48□□□□□ -0.09
CDH13P55290 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH13P55290 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.48□□□□□ -0.09
CDH13P55290 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH13P55290 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.48□□□□□ -0.09
CDH13P55290 KRT18P25-201ENST00000508931 1278 ntBASIC14.48□□□□□ -0.09
CDH13P55290 AC131206.1-201ENST00000538078 1211 ntBASIC14.48□□□□□ -0.09
CDH13P55290 ENPP7P5-201ENST00000541031 1031 ntBASIC14.48□□□□□ -0.09
CDH13P55290 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH13P55290 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.48□□□□□ -0.09
CDH13P55290 AP001063.1-201ENST00000568332 529 ntBASIC14.48□□□□□ -0.09
CDH13P55290 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.48□□□□□ -0.09
CDH13P55290 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CDH13P55290 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH13P55290 WFDC1-204ENST00000613603 549 ntBASIC14.48□□□□□ -0.09
CDH13P55290 CU634019.7-201ENST00000624153 1185 ntBASIC14.48□□□□□ -0.09
CDH13P55290 FP236241.2-201ENST00000624906 1185 ntBASIC14.48□□□□□ -0.09
CDH13P55290 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH13P55290 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH13P55290 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CDH13P55290 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms