Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CDH11P55287 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.62□□□□□ -0.23
CDH11P55287 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDH11P55287 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.62□□□□□ -0.23
CDH11P55287 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.62□□□□□ -0.23
CDH11P55287 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.62□□□□□ -0.23
CDH11P55287 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDH11P55287 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.62□□□□□ -0.23
CDH11P55287 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.62□□□□□ -0.23
CDH11P55287 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.62□□□□□ -0.23
CDH11P55287 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.62□□□□□ -0.23
CDH11P55287 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.62□□□□□ -0.23
CDH11P55287 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.62□□□□□ -0.23
CDH11P55287 TMEM261P1-201ENST00000604899 340 ntBASIC13.62□□□□□ -0.23
CDH11P55287 WFDC1-204ENST00000613603 549 ntBASIC13.62□□□□□ -0.23
CDH11P55287 MIR8072-201ENST00000614241 80 ntBASIC13.62□□□□□ -0.23
CDH11P55287 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.62□□□□□ -0.23
CDH11P55287 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.62□□□□□ -0.23
CDH11P55287 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDH11P55287 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDH11P55287 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDH11P55287 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.62□□□□□ -0.23
CDH11P55287 DMBT1P1-203ENST00000636837 4628 ntBASIC13.62□□□□□ -0.23
CDH11P55287 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDH11P55287 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDH11P55287 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.62□□□□□ -0.23
CDH11P55287 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CDH11P55287 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.62□□□□□ -0.23
CDH11P55287 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.62□□□□□ -0.23
CDH11P55287 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.62□□□□□ -0.23
CDH11P55287 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.62□□□□□ -0.23
CDH11P55287 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.61□□□□□ -0.23
CDH11P55287 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH11P55287 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDH11P55287 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH11P55287 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CDH11P55287 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH11P55287 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CDH11P55287 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
CDH11P55287 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDH11P55287 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.61□□□□□ -0.23
CDH11P55287 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH11P55287 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
CDH11P55287 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.61□□□□□ -0.23
CDH11P55287 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH11P55287 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH11P55287 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH11P55287 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CDH11P55287 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CDH11P55287 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH11P55287 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH11P55287 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.61□□□□□ -0.23
CDH11P55287 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
CDH11P55287 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.61□□□□□ -0.23
CDH11P55287 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.61□□□□□ -0.23
CDH11P55287 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CDH11P55287 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH11P55287 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDH11P55287 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.61□□□□□ -0.23
CDH11P55287 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CDH11P55287 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.61□□□□□ -0.23
CDH11P55287 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.61□□□□□ -0.23
CDH11P55287 IGHV3-71-201ENST00000523324 359 ntBASIC13.61□□□□□ -0.23
CDH11P55287 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.61□□□□□ -0.23
CDH11P55287 HILS1-202ENST00000545329 423 ntBASIC13.61□□□□□ -0.23
CDH11P55287 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.61□□□□□ -0.23
CDH11P55287 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.61□□□□□ -0.23
CDH11P55287 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.61□□□□□ -0.23
CDH11P55287 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDH11P55287 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.61□□□□□ -0.23
CDH11P55287 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.61□□□□□ -0.23
CDH11P55287 AL359881.2-201ENST00000602973 570 ntBASIC13.61□□□□□ -0.23
CDH11P55287 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.61□□□□□ -0.23
CDH11P55287 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CDH11P55287 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDH11P55287 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH11P55287 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH11P55287 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDH11P55287 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH11P55287 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.61□□□□□ -0.23
CDH11P55287 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.61□□□□□ -0.23
CDH11P55287 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH11P55287 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH11P55287 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
CDH11P55287 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH11P55287 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH11P55287 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDH11P55287 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH11P55287 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
CDH11P55287 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.61□□□□□ -0.23
CDH11P55287 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH11P55287 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.61□□□□□ -0.23
CDH11P55287 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH11P55287 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDH11P55287 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CDH11P55287 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDH11P55287 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.6□□□□□ -0.23
CDH11P55287 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CDH11P55287 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CDH11P55287 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms