Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 AC006449.5-201ENST00000610658 2098 ntBASIC13.36□□□□□ -0.27
CASP6P55212 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CASP6P55212 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CASP6P55212 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CASP6P55212 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CASP6P55212 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CASP6P55212 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.36□□□□□ -0.27
CASP6P55212 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.36□□□□□ -0.27
CASP6P55212 CYP2T1P-202ENST00000641596 2535 ntBASIC13.36□□□□□ -0.27
CASP6P55212 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
CASP6P55212 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CASP6P55212 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CASP6P55212 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CASP6P55212 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CASP6P55212 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CASP6P55212 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.35□□□□□ -0.27
CASP6P55212 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CASP6P55212 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CASP6P55212 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.35□□□□□ -0.27
CASP6P55212 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CASP6P55212 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CASP6P55212 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CASP6P55212 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CASP6P55212 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CASP6P55212 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CASP6P55212 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CASP6P55212 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CASP6P55212 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.35□□□□□ -0.27
CASP6P55212 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CASP6P55212 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CASP6P55212 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.35□□□□□ -0.27
CASP6P55212 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.35□□□□□ -0.27
CASP6P55212 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CASP6P55212 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CASP6P55212 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CASP6P55212 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CASP6P55212 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CASP6P55212 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.35□□□□□ -0.27
CASP6P55212 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CASP6P55212 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CASP6P55212 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
CASP6P55212 MIR33B-201ENST00000385104 96 ntBASIC13.35□□□□□ -0.27
CASP6P55212 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
CASP6P55212 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CASP6P55212 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CASP6P55212 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.35□□□□□ -0.27
CASP6P55212 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CASP6P55212 RCC2P8-201ENST00000502779 1035 ntBASIC13.35□□□□□ -0.27
CASP6P55212 IGLV3-15-201ENST00000518356 244 ntBASIC13.35□□□□□ -0.27
CASP6P55212 PRKXP1-201ENST00000561423 1122 ntBASIC13.35□□□□□ -0.27
CASP6P55212 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CASP6P55212 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.35□□□□□ -0.27
CASP6P55212 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.35□□□□□ -0.27
CASP6P55212 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CASP6P55212 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13.35□□□□□ -0.27
CASP6P55212 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.35□□□□□ -0.27
CASP6P55212 U62317.3-201ENST00000608319 855 ntBASIC13.35□□□□□ -0.27
CASP6P55212 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
CASP6P55212 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CASP6P55212 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.35□□□□□ -0.27
CASP6P55212 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CASP6P55212 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CASP6P55212 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CASP6P55212 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.35□□□□□ -0.27
CASP6P55212 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CASP6P55212 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CASP6P55212 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CASP6P55212 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.35□□□□□ -0.27
CASP6P55212 AC012508.2-201ENST00000567613 1472 ntBASIC13.35□□□□□ -0.27
CASP6P55212 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CASP6P55212 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CASP6P55212 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CASP6P55212 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CASP6P55212 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.35□□□□□ -0.27
CASP6P55212 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CASP6P55212 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CASP6P55212 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CASP6P55212 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CASP6P55212 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CASP6P55212 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CASP6P55212 AC104640.1-201ENST00000562617 2109 ntBASIC13.34□□□□□ -0.27
CASP6P55212 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CASP6P55212 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CASP6P55212 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
CASP6P55212 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CASP6P55212 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CASP6P55212 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.34□□□□□ -0.27
CASP6P55212 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.34□□□□□ -0.27
CASP6P55212 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CASP6P55212 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CASP6P55212 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CASP6P55212 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CASP6P55212 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC13.34□□□□□ -0.27
CASP6P55212 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.34□□□□□ -0.27
CASP6P55212 AC092127.1-201ENST00000567093 3455 ntBASIC13.34□□□□□ -0.27
CASP6P55212 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CASP6P55212 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.34□□□□□ -0.27
CASP6P55212 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CASP6P55212 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CASP6P55212 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms