Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC10.82□□□□□ -0.68
APOC4P55056 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC10.82□□□□□ -0.68
APOC4P55056 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
APOC4P55056 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC10.82□□□□□ -0.68
APOC4P55056 AC008805.1-201ENST00000590892 364 ntBASIC10.82□□□□□ -0.68
APOC4P55056 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
APOC4P55056 AL451050.2-201ENST00000606967 682 ntBASIC10.82□□□□□ -0.68
APOC4P55056 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC10.82□□□□□ -0.68
APOC4P55056 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
APOC4P55056 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC10.82□□□□□ -0.68
APOC4P55056 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
APOC4P55056 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
APOC4P55056 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC10.82□□□□□ -0.68
APOC4P55056 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
APOC4P55056 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
APOC4P55056 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
APOC4P55056 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
APOC4P55056 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
APOC4P55056 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC10.82□□□□□ -0.68
APOC4P55056 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
APOC4P55056 AC073347.1-201ENST00000421633 2643 ntBASIC10.82□□□□□ -0.68
APOC4P55056 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC10.82□□□□□ -0.68
APOC4P55056 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
APOC4P55056 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
APOC4P55056 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC10.82□□□□□ -0.68
APOC4P55056 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
APOC4P55056 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
APOC4P55056 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
APOC4P55056 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
APOC4P55056 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
APOC4P55056 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
APOC4P55056 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC10.81□□□□□ -0.68
APOC4P55056 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC10.81□□□□□ -0.68
APOC4P55056 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
APOC4P55056 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
APOC4P55056 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC10.81□□□□□ -0.68
APOC4P55056 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
APOC4P55056 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC10.81□□□□□ -0.68
APOC4P55056 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC10.81□□□□□ -0.68
APOC4P55056 AC132872.4-202ENST00000622924 2756 ntBASIC10.81□□□□□ -0.68
APOC4P55056 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 API5-203ENST00000455725 2257 ntTSL 2 BASIC10.81□□□□□ -0.68
APOC4P55056 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC10.81□□□□□ -0.68
APOC4P55056 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
APOC4P55056 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC10.81□□□□□ -0.68
APOC4P55056 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 Z97180.1-201ENST00000445173 988 ntBASIC10.81□□□□□ -0.68
APOC4P55056 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC10.81□□□□□ -0.68
APOC4P55056 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
APOC4P55056 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC10.81□□□□□ -0.68
APOC4P55056 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC10.81□□□□□ -0.68
APOC4P55056 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC10.81□□□□□ -0.68
APOC4P55056 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC10.81□□□□□ -0.68
APOC4P55056 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
APOC4P55056 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 AP000346.4-201ENST00000614827 381 ntBASIC10.81□□□□□ -0.68
APOC4P55056 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC10.81□□□□□ -0.68
APOC4P55056 RPL35-206ENST00000629845 340 ntTSL 5 BASIC10.81□□□□□ -0.68
APOC4P55056 AL139099.5-201ENST00000635274 300 ntBASIC10.81□□□□□ -0.68
APOC4P55056 NAP1L6-202ENST00000641404 1222 ntBASIC10.81□□□□□ -0.68
APOC4P55056 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
APOC4P55056 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC10.81□□□□□ -0.68
APOC4P55056 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
APOC4P55056 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
APOC4P55056 AC007292.2-201ENST00000593524 1812 ntBASIC10.81□□□□□ -0.68
APOC4P55056 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
APOC4P55056 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
APOC4P55056 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms