Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 NUDT4P2-201ENST00000578341 546 ntBASIC16.85■□□□□ 0.29
HMGCS2P54868 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCS2P54868 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
HMGCS2P54868 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HMGCS2P54868 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCS2P54868 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
HMGCS2P54868 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC16.85■□□□□ 0.29
HMGCS2P54868 AL109954.1-202ENST00000564051 2148 ntBASIC16.85■□□□□ 0.29
HMGCS2P54868 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
HMGCS2P54868 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.85■□□□□ 0.29
HMGCS2P54868 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCS2P54868 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCS2P54868 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCS2P54868 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCS2P54868 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.85■□□□□ 0.29
HMGCS2P54868 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCS2P54868 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HMGCS2P54868 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS2P54868 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS2P54868 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS2P54868 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HMGCS2P54868 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.84■□□□□ 0.29
HMGCS2P54868 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS2P54868 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS2P54868 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
HMGCS2P54868 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
HMGCS2P54868 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS2P54868 JTB-202ENST00000356648 1040 ntTSL 2 BASIC16.84■□□□□ 0.29
HMGCS2P54868 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.84■□□□□ 0.29
HMGCS2P54868 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS2P54868 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.84■□□□□ 0.29
HMGCS2P54868 AC097065.1-201ENST00000425737 517 ntBASIC16.84■□□□□ 0.29
HMGCS2P54868 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS2P54868 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC16.84■□□□□ 0.29
HMGCS2P54868 CD164-210ENST00000512821 964 ntTSL 2 BASIC16.84■□□□□ 0.29
HMGCS2P54868 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16.84■□□□□ 0.29
HMGCS2P54868 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS2P54868 KRT8P1-201ENST00000557533 1207 ntBASIC16.84■□□□□ 0.29
HMGCS2P54868 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC16.84■□□□□ 0.29
HMGCS2P54868 AL132780.4-201ENST00000624870 1135 ntBASIC16.84■□□□□ 0.29
HMGCS2P54868 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS2P54868 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HMGCS2P54868 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS2P54868 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS2P54868 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS2P54868 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.84■□□□□ 0.29
HMGCS2P54868 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS2P54868 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS2P54868 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS2P54868 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS2P54868 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS2P54868 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS2P54868 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.84■□□□□ 0.29
HMGCS2P54868 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS2P54868 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC16.84■□□□□ 0.29
HMGCS2P54868 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
HMGCS2P54868 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.84■□□□□ 0.29
HMGCS2P54868 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS2P54868 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.84■□□□□ 0.29
HMGCS2P54868 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.84■□□□□ 0.29
HMGCS2P54868 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.84■□□□□ 0.29
HMGCS2P54868 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGCS2P54868 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.84■□□□□ 0.29
HMGCS2P54868 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
HMGCS2P54868 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.29
HMGCS2P54868 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCS2P54868 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCS2P54868 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCS2P54868 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCS2P54868 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCS2P54868 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HMGCS2P54868 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCS2P54868 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCS2P54868 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCS2P54868 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.83■□□□□ 0.28
HMGCS2P54868 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCS2P54868 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCS2P54868 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HMGCS2P54868 HLA-DMA-203ENST00000395305 777 ntBASIC16.83■□□□□ 0.28
HMGCS2P54868 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.83■□□□□ 0.28
HMGCS2P54868 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
HMGCS2P54868 AC073869.2-201ENST00000417338 1026 ntBASIC16.83■□□□□ 0.28
HMGCS2P54868 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCS2P54868 AC092580.1-201ENST00000433998 658 ntBASIC16.83■□□□□ 0.28
HMGCS2P54868 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC16.83■□□□□ 0.28
HMGCS2P54868 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.83■□□□□ 0.28
HMGCS2P54868 KRT18P66-201ENST00000452970 1269 ntBASIC16.83■□□□□ 0.28
HMGCS2P54868 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCS2P54868 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HMGCS2P54868 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC16.83■□□□□ 0.28
HMGCS2P54868 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC16.83■□□□□ 0.28
HMGCS2P54868 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.83■□□□□ 0.28
HMGCS2P54868 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCS2P54868 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC16.83■□□□□ 0.28
HMGCS2P54868 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCS2P54868 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC16.83■□□□□ 0.28
HMGCS2P54868 AC105137.3-201ENST00000617588 984 ntBASIC16.83■□□□□ 0.28
HMGCS2P54868 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGCS2P54868 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC16.83■□□□□ 0.28
HMGCS2P54868 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms