Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC019193.1-201ENST00000506678 823 ntBASIC15.33■□□□□ 0.04
EPHB3P54753 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC15.33■□□□□ 0.04
EPHB3P54753 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.33■□□□□ 0.04
EPHB3P54753 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.33■□□□□ 0.04
EPHB3P54753 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC15.33■□□□□ 0.04
EPHB3P54753 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC15.33■□□□□ 0.04
EPHB3P54753 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
EPHB3P54753 MIR4706-201ENST00000582134 82 ntBASIC15.33■□□□□ 0.04
EPHB3P54753 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
EPHB3P54753 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
EPHB3P54753 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.33■□□□□ 0.04
EPHB3P54753 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC15.33■□□□□ 0.04
EPHB3P54753 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.33■□□□□ 0.04
EPHB3P54753 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
EPHB3P54753 AC013268.4-201ENST00000637413 2228 ntBASIC15.33■□□□□ 0.04
EPHB3P54753 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
EPHB3P54753 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
EPHB3P54753 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
EPHB3P54753 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
EPHB3P54753 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
EPHB3P54753 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
EPHB3P54753 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
EPHB3P54753 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
EPHB3P54753 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
EPHB3P54753 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
EPHB3P54753 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHB3P54753 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
EPHB3P54753 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHB3P54753 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EPHB3P54753 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHB3P54753 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
EPHB3P54753 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHB3P54753 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EPHB3P54753 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHB3P54753 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.32■□□□□ 0.04
EPHB3P54753 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHB3P54753 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.32■□□□□ 0.04
EPHB3P54753 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
EPHB3P54753 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
EPHB3P54753 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHB3P54753 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHB3P54753 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHB3P54753 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC15.32■□□□□ 0.04
EPHB3P54753 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHB3P54753 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC15.32■□□□□ 0.04
EPHB3P54753 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EPHB3P54753 MPV17-204ENST00000399052 749 ntTSL 4 BASIC15.32■□□□□ 0.04
EPHB3P54753 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.32■□□□□ 0.04
EPHB3P54753 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC15.32■□□□□ 0.04
EPHB3P54753 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC15.32■□□□□ 0.04
EPHB3P54753 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC15.32■□□□□ 0.04
EPHB3P54753 MPRIPP1-201ENST00000452433 1089 ntBASIC15.32■□□□□ 0.04
EPHB3P54753 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC15.32■□□□□ 0.04
EPHB3P54753 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EPHB3P54753 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EPHB3P54753 PGAM1P5-201ENST00000548011 764 ntBASIC15.32■□□□□ 0.04
EPHB3P54753 AC003686.1-201ENST00000550956 1034 ntBASIC15.32■□□□□ 0.04
EPHB3P54753 AC026803.1-201ENST00000569130 274 ntBASIC15.32■□□□□ 0.04
EPHB3P54753 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC15.32■□□□□ 0.04
EPHB3P54753 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.32■□□□□ 0.04
EPHB3P54753 AL109837.1-201ENST00000603272 613 ntBASIC15.32■□□□□ 0.04
EPHB3P54753 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHB3P54753 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHB3P54753 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHB3P54753 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EPHB3P54753 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EPHB3P54753 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
EPHB3P54753 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC15.32■□□□□ 0.04
EPHB3P54753 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EPHB3P54753 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHB3P54753 AC007326.2-201ENST00000624224 7579 ntBASIC15.32■□□□□ 0.04
EPHB3P54753 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EPHB3P54753 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHB3P54753 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHB3P54753 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
EPHB3P54753 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.32■□□□□ 0.04
EPHB3P54753 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
EPHB3P54753 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHB3P54753 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
EPHB3P54753 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
EPHB3P54753 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.32■□□□□ 0.04
EPHB3P54753 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.31■□□□□ 0.04
EPHB3P54753 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHB3P54753 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.31■□□□□ 0.04
EPHB3P54753 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
EPHB3P54753 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
EPHB3P54753 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.31■□□□□ 0.04
EPHB3P54753 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
EPHB3P54753 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHB3P54753 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHB3P54753 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHB3P54753 OR2I1P-209ENST00000641730 5365 ntBASIC15.31■□□□□ 0.04
EPHB3P54753 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHB3P54753 AC006504.5-208ENST00000588784 2401 ntBASIC15.31■□□□□ 0.04
EPHB3P54753 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.31■□□□□ 0.04
EPHB3P54753 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHB3P54753 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
EPHB3P54753 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHB3P54753 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
EPHB3P54753 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms