Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
HMGA2P52926 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.46□□□□□ -0.25
HMGA2P52926 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.46□□□□□ -0.25
HMGA2P52926 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMGA2P52926 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.46□□□□□ -0.25
HMGA2P52926 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMGA2P52926 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.46□□□□□ -0.25
HMGA2P52926 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
HMGA2P52926 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMGA2P52926 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
HMGA2P52926 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HMGA2P52926 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HMGA2P52926 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
HMGA2P52926 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HMGA2P52926 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.46□□□□□ -0.26
HMGA2P52926 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
HMGA2P52926 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HMGA2P52926 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HMGA2P52926 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
HMGA2P52926 MIR600HG-201ENST00000449175 5984 ntBASIC13.46□□□□□ -0.26
HMGA2P52926 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HMGA2P52926 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
HMGA2P52926 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HMGA2P52926 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
HMGA2P52926 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
HMGA2P52926 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.46□□□□□ -0.26
HMGA2P52926 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.46□□□□□ -0.26
HMGA2P52926 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGA2P52926 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGA2P52926 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.45□□□□□ -0.26
HMGA2P52926 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGA2P52926 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGA2P52926 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.45□□□□□ -0.26
HMGA2P52926 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HMGA2P52926 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.45□□□□□ -0.26
HMGA2P52926 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.45□□□□□ -0.26
HMGA2P52926 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGA2P52926 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
HMGA2P52926 CLUHP2-201ENST00000426660 1303 ntBASIC13.45□□□□□ -0.26
HMGA2P52926 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.45□□□□□ -0.26
HMGA2P52926 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGA2P52926 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGA2P52926 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGA2P52926 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HMGA2P52926 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGA2P52926 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HMGA2P52926 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.45□□□□□ -0.26
HMGA2P52926 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGA2P52926 ARSEP1-201ENST00000420443 635 ntBASIC13.45□□□□□ -0.26
HMGA2P52926 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.45□□□□□ -0.26
HMGA2P52926 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.45□□□□□ -0.26
HMGA2P52926 AC055876.2-201ENST00000531834 546 ntBASIC13.45□□□□□ -0.26
HMGA2P52926 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HMGA2P52926 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.45□□□□□ -0.26
HMGA2P52926 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.45□□□□□ -0.26
HMGA2P52926 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.45□□□□□ -0.26
HMGA2P52926 TMEM261P1-201ENST00000604899 340 ntBASIC13.45□□□□□ -0.26
HMGA2P52926 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.45□□□□□ -0.26
HMGA2P52926 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.45□□□□□ -0.26
HMGA2P52926 AC114271.1-201ENST00000612689 2813 ntBASIC13.45□□□□□ -0.26
HMGA2P52926 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
HMGA2P52926 AL022313.4-201ENST00000562756 2046 ntBASIC13.45□□□□□ -0.26
HMGA2P52926 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGA2P52926 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.45□□□□□ -0.26
HMGA2P52926 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.45□□□□□ -0.26
HMGA2P52926 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.45□□□□□ -0.26
HMGA2P52926 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.45□□□□□ -0.26
HMGA2P52926 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGA2P52926 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
HMGA2P52926 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGA2P52926 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.45□□□□□ -0.26
HMGA2P52926 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGA2P52926 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGA2P52926 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGA2P52926 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGA2P52926 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.45□□□□□ -0.26
HMGA2P52926 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
HMGA2P52926 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.44□□□□□ -0.26
HMGA2P52926 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
HMGA2P52926 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
HMGA2P52926 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
HMGA2P52926 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGA2P52926 AC020910.5-201ENST00000623668 1865 ntBASIC13.44□□□□□ -0.26
HMGA2P52926 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
HMGA2P52926 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.44□□□□□ -0.26
HMGA2P52926 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.44□□□□□ -0.26
HMGA2P52926 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGA2P52926 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGA2P52926 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGA2P52926 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.44□□□□□ -0.26
HMGA2P52926 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGA2P52926 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.44□□□□□ -0.26
HMGA2P52926 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGA2P52926 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
HMGA2P52926 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGA2P52926 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.44□□□□□ -0.26
HMGA2P52926 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGA2P52926 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
HMGA2P52926 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGA2P52926 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms