Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1A1P48729 GAPDHP21-201ENST00000450301 1010 ntBASIC13.19□□□□□ -0.3
CSNK1A1P48729 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CSNK1A1P48729 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.19□□□□□ -0.3
CSNK1A1P48729 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1A1P48729 GCOM2-201ENST00000509133 1104 ntBASIC13.19□□□□□ -0.3
CSNK1A1P48729 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.19□□□□□ -0.3
CSNK1A1P48729 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.19□□□□□ -0.3
CSNK1A1P48729 AC078819.1-201ENST00000547454 765 ntBASIC13.19□□□□□ -0.3
CSNK1A1P48729 AC012085.1-201ENST00000548270 765 ntBASIC13.19□□□□□ -0.3
CSNK1A1P48729 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.19□□□□□ -0.3
CSNK1A1P48729 AC106820.3-201ENST00000561653 397 ntBASIC13.19□□□□□ -0.3
CSNK1A1P48729 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.19□□□□□ -0.3
CSNK1A1P48729 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CSNK1A1P48729 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1A1P48729 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1A1P48729 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1A1P48729 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1A1P48729 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1A1P48729 AP000593.2-201ENST00000542775 1433 ntBASIC13.19□□□□□ -0.3
CSNK1A1P48729 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.19□□□□□ -0.3
CSNK1A1P48729 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CSNK1A1P48729 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1A1P48729 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.19□□□□□ -0.3
CSNK1A1P48729 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1A1P48729 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1A1P48729 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.19□□□□□ -0.3
CSNK1A1P48729 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
CSNK1A1P48729 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1A1P48729 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1A1P48729 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CSNK1A1P48729 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.19□□□□□ -0.3
CSNK1A1P48729 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CSNK1A1P48729 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1A1P48729 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CSNK1A1P48729 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1A1P48729 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1A1P48729 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1A1P48729 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CSNK1A1P48729 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CSNK1A1P48729 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1A1P48729 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1A1P48729 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CSNK1A1P48729 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.18□□□□□ -0.3
CSNK1A1P48729 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1A1P48729 AGGF1P1-201ENST00000509500 2073 ntBASIC13.18□□□□□ -0.3
CSNK1A1P48729 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.18□□□□□ -0.3
CSNK1A1P48729 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1A1P48729 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1A1P48729 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1A1P48729 BOLA2P3-201ENST00000404566 256 ntBASIC13.18□□□□□ -0.3
CSNK1A1P48729 RN7SKP175-201ENST00000408472 289 ntBASIC13.18□□□□□ -0.3
CSNK1A1P48729 CNN2P8-201ENST00000421872 913 ntBASIC13.18□□□□□ -0.3
CSNK1A1P48729 AC005034.1-201ENST00000426657 489 ntBASIC13.18□□□□□ -0.3
CSNK1A1P48729 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1A1P48729 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.18□□□□□ -0.3
CSNK1A1P48729 AC234783.1-201ENST00000441761 496 ntBASIC13.18□□□□□ -0.3
CSNK1A1P48729 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.18□□□□□ -0.3
CSNK1A1P48729 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1A1P48729 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CSNK1A1P48729 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.18□□□□□ -0.3
CSNK1A1P48729 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.18□□□□□ -0.3
CSNK1A1P48729 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.18□□□□□ -0.3
CSNK1A1P48729 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.18□□□□□ -0.3
CSNK1A1P48729 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CSNK1A1P48729 AC006453.4-201ENST00000636949 1252 ntBASIC13.18□□□□□ -0.3
CSNK1A1P48729 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1A1P48729 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.18□□□□□ -0.3
CSNK1A1P48729 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1A1P48729 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.18□□□□□ -0.3
CSNK1A1P48729 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
CSNK1A1P48729 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.18□□□□□ -0.3
CSNK1A1P48729 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1A1P48729 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.18□□□□□ -0.3
CSNK1A1P48729 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1A1P48729 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1A1P48729 AC007191.1-201ENST00000623179 2995 ntBASIC13.18□□□□□ -0.3
CSNK1A1P48729 INE2-201ENST00000630399 1874 ntBASIC13.18□□□□□ -0.3
CSNK1A1P48729 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CSNK1A1P48729 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.18□□□□□ -0.3
CSNK1A1P48729 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1A1P48729 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1A1P48729 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.18□□□□□ -0.3
CSNK1A1P48729 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1A1P48729 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1A1P48729 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSNK1A1P48729 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1A1P48729 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.17□□□□□ -0.3
CSNK1A1P48729 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CSNK1A1P48729 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1A1P48729 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
CSNK1A1P48729 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1A1P48729 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1A1P48729 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
CSNK1A1P48729 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1A1P48729 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1A1P48729 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1A1P48729 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSNK1A1P48729 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CSNK1A1P48729 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms