Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC6A12P48065 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC6A12P48065 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC6A12P48065 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
SLC6A12P48065 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SLC6A12P48065 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC6A12P48065 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC6A12P48065 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC6A12P48065 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC6A12P48065 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC6A12P48065 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC6A12P48065 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC6A12P48065 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC6A12P48065 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.2□□□□□ -0.14
SLC6A12P48065 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SLC6A12P48065 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC6A12P48065 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC6A12P48065 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC6A12P48065 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.2□□□□□ -0.14
SLC6A12P48065 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC6A12P48065 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC6A12P48065 AC041040.2-201ENST00000622926 2899 ntBASIC14.2□□□□□ -0.14
SLC6A12P48065 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC6A12P48065 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC6A12P48065 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.2□□□□□ -0.14
SLC6A12P48065 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.2□□□□□ -0.14
SLC6A12P48065 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.2□□□□□ -0.14
SLC6A12P48065 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
SLC6A12P48065 AC234783.1-201ENST00000441761 496 ntBASIC14.2□□□□□ -0.14
SLC6A12P48065 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC6A12P48065 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.2□□□□□ -0.14
SLC6A12P48065 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
SLC6A12P48065 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC6A12P48065 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.2□□□□□ -0.14
SLC6A12P48065 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC6A12P48065 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC6A12P48065 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.2□□□□□ -0.14
SLC6A12P48065 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.2□□□□□ -0.14
SLC6A12P48065 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.2□□□□□ -0.14
SLC6A12P48065 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.2□□□□□ -0.14
SLC6A12P48065 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.2□□□□□ -0.14
SLC6A12P48065 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SLC6A12P48065 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC6A12P48065 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC6A12P48065 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.2□□□□□ -0.14
SLC6A12P48065 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC6A12P48065 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SLC6A12P48065 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC6A12P48065 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC6A12P48065 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC6A12P48065 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC6A12P48065 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
SLC6A12P48065 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SLC6A12P48065 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
SLC6A12P48065 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC6A12P48065 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC6A12P48065 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.2□□□□□ -0.14
SLC6A12P48065 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SLC6A12P48065 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SLC6A12P48065 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC6A12P48065 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC6A12P48065 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
SLC6A12P48065 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.19□□□□□ -0.14
SLC6A12P48065 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLC6A12P48065 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC6A12P48065 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLC6A12P48065 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC6A12P48065 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC6A12P48065 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC6A12P48065 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.19□□□□□ -0.14
SLC6A12P48065 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SLC6A12P48065 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC6A12P48065 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC6A12P48065 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLC6A12P48065 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC6A12P48065 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SLC6A12P48065 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.19□□□□□ -0.14
SLC6A12P48065 AL161932.2-201ENST00000435436 679 ntBASIC14.19□□□□□ -0.14
SLC6A12P48065 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.19□□□□□ -0.14
SLC6A12P48065 SNX29P1-201ENST00000548357 1007 ntBASIC14.19□□□□□ -0.14
SLC6A12P48065 AC023310.1-201ENST00000554836 735 ntBASIC14.19□□□□□ -0.14
SLC6A12P48065 RAB43P1-201ENST00000561790 589 ntBASIC14.19□□□□□ -0.14
SLC6A12P48065 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.19□□□□□ -0.14
SLC6A12P48065 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLC6A12P48065 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.19□□□□□ -0.14
SLC6A12P48065 AC132192.2-201ENST00000596206 1147 ntBASIC14.19□□□□□ -0.14
SLC6A12P48065 AC239800.4-201ENST00000603712 296 ntBASIC14.19□□□□□ -0.14
SLC6A12P48065 AC104506.1-201ENST00000609247 429 ntBASIC14.19□□□□□ -0.14
SLC6A12P48065 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SLC6A12P48065 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SLC6A12P48065 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC6A12P48065 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC6A12P48065 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC6A12P48065 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLC6A12P48065 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLC6A12P48065 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.19□□□□□ -0.14
SLC6A12P48065 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SLC6A12P48065 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC6A12P48065 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SLC6A12P48065 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms