Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
CXCL5P42830 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
CXCL5P42830 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
CXCL5P42830 AL354702.1-201ENST00000442006 1960 ntBASIC10.05□□□□□ -0.8
CXCL5P42830 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC10.05□□□□□ -0.8
CXCL5P42830 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
CXCL5P42830 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CXCL5P42830 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC10.04□□□□□ -0.8
CXCL5P42830 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
CXCL5P42830 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
CXCL5P42830 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC10.04□□□□□ -0.8
CXCL5P42830 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
CXCL5P42830 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CXCL5P42830 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CXCL5P42830 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
CXCL5P42830 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
CXCL5P42830 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
CXCL5P42830 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
CXCL5P42830 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
CXCL5P42830 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CXCL5P42830 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
CXCL5P42830 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
CXCL5P42830 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CXCL5P42830 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
CXCL5P42830 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
CXCL5P42830 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC10.04□□□□□ -0.8
CXCL5P42830 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC10.04□□□□□ -0.8
CXCL5P42830 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
CXCL5P42830 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CXCL5P42830 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CXCL5P42830 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
CXCL5P42830 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
CXCL5P42830 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC10.04□□□□□ -0.8
CXCL5P42830 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CXCL5P42830 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
CXCL5P42830 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CXCL5P42830 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC10.04□□□□□ -0.8
CXCL5P42830 FAM58DP-201ENST00000428076 619 ntBASIC10.04□□□□□ -0.8
CXCL5P42830 ALG1L5P-201ENST00000482043 771 ntBASIC10.04□□□□□ -0.8
CXCL5P42830 SATB1-217ENST00000493952 626 ntTSL 3 BASIC10.04□□□□□ -0.8
CXCL5P42830 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC10.04□□□□□ -0.8
CXCL5P42830 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC10.04□□□□□ -0.8
CXCL5P42830 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC10.04□□□□□ -0.8
CXCL5P42830 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC10.04□□□□□ -0.8
CXCL5P42830 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC10.04□□□□□ -0.8
CXCL5P42830 TIMM17BP1-201ENST00000545713 516 ntBASIC10.04□□□□□ -0.8
CXCL5P42830 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC10.04□□□□□ -0.8
CXCL5P42830 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC10.04□□□□□ -0.8
CXCL5P42830 MIR4453-201ENST00000584019 89 ntBASIC10.04□□□□□ -0.8
CXCL5P42830 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC10.04□□□□□ -0.8
CXCL5P42830 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC10.04□□□□□ -0.8
CXCL5P42830 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC10.04□□□□□ -0.8
CXCL5P42830 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC10.04□□□□□ -0.8
CXCL5P42830 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC10.04□□□□□ -0.8
CXCL5P42830 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC10.04□□□□□ -0.8
CXCL5P42830 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC10.04□□□□□ -0.8
CXCL5P42830 AF228730.6-201ENST00000641497 218 ntBASIC10.04□□□□□ -0.8
CXCL5P42830 AC084121.3-201ENST00000641716 218 ntBASIC10.04□□□□□ -0.8
CXCL5P42830 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CXCL5P42830 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC10.04□□□□□ -0.8
CXCL5P42830 CIC-204ENST00000572681 8218 ntTSL 5 BASIC10.04□□□□□ -0.8
CXCL5P42830 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CXCL5P42830 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
CXCL5P42830 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
CXCL5P42830 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
CXCL5P42830 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
CXCL5P42830 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CXCL5P42830 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC10.04□□□□□ -0.8
CXCL5P42830 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CXCL5P42830 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC10.04□□□□□ -0.8
CXCL5P42830 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CXCL5P42830 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC10.04□□□□□ -0.8
CXCL5P42830 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
CXCL5P42830 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
CXCL5P42830 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
CXCL5P42830 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
CXCL5P42830 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
CXCL5P42830 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC10.04□□□□□ -0.8
CXCL5P42830 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CXCL5P42830 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CXCL5P42830 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CXCL5P42830 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC10.04□□□□□ -0.8
CXCL5P42830 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
CXCL5P42830 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC10.04□□□□□ -0.8
CXCL5P42830 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CXCL5P42830 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC10.04□□□□□ -0.8
CXCL5P42830 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
CXCL5P42830 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
CXCL5P42830 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC10.03□□□□□ -0.8
CXCL5P42830 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC10.03□□□□□ -0.8
CXCL5P42830 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
CXCL5P42830 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC10.03□□□□□ -0.8
CXCL5P42830 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 AC083964.2-201ENST00000623988 2396 ntBASIC10.03□□□□□ -0.8
CXCL5P42830 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
CXCL5P42830 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms