Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 AC025181.2-201ENST00000606994 802 ntBASIC12.95□□□□□ -0.34
GDNFP39905 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
GDNFP39905 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.95□□□□□ -0.34
GDNFP39905 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GDNFP39905 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GDNFP39905 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GDNFP39905 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GDNFP39905 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
GDNFP39905 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GDNFP39905 AC020910.6-201ENST00000623084 1459 ntBASIC12.95□□□□□ -0.34
GDNFP39905 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GDNFP39905 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
GDNFP39905 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.95□□□□□ -0.34
GDNFP39905 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.95□□□□□ -0.34
GDNFP39905 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
GDNFP39905 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
GDNFP39905 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GDNFP39905 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.95□□□□□ -0.34
GDNFP39905 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.95□□□□□ -0.34
GDNFP39905 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.95□□□□□ -0.34
GDNFP39905 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GDNFP39905 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
GDNFP39905 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
GDNFP39905 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
GDNFP39905 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
GDNFP39905 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
GDNFP39905 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GDNFP39905 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
GDNFP39905 AC114271.1-201ENST00000612689 2813 ntBASIC12.94□□□□□ -0.34
GDNFP39905 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
GDNFP39905 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GDNFP39905 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
GDNFP39905 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.94□□□□□ -0.34
GDNFP39905 AC087499.5-201ENST00000452760 1342 ntBASIC12.94□□□□□ -0.34
GDNFP39905 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.94□□□□□ -0.34
GDNFP39905 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
GDNFP39905 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
GDNFP39905 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.94□□□□□ -0.34
GDNFP39905 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
GDNFP39905 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
GDNFP39905 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
GDNFP39905 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
GDNFP39905 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.94□□□□□ -0.34
GDNFP39905 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
GDNFP39905 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
GDNFP39905 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GDNFP39905 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GDNFP39905 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GDNFP39905 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.94□□□□□ -0.34
GDNFP39905 AC055876.3-201ENST00000431496 288 ntBASIC12.94□□□□□ -0.34
GDNFP39905 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GDNFP39905 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.94□□□□□ -0.34
GDNFP39905 RFPL4AP1-201ENST00000530883 850 ntBASIC12.94□□□□□ -0.34
GDNFP39905 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.94□□□□□ -0.34
GDNFP39905 NIFKP4-201ENST00000567275 1192 ntBASIC12.94□□□□□ -0.34
GDNFP39905 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
GDNFP39905 AC138649.4-201ENST00000612222 287 ntBASIC12.94□□□□□ -0.34
GDNFP39905 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.94□□□□□ -0.34
GDNFP39905 AL589935.2-201ENST00000616471 1231 ntBASIC12.94□□□□□ -0.34
GDNFP39905 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.94□□□□□ -0.34
GDNFP39905 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
GDNFP39905 AC004241.5-201ENST00000623870 2448 ntBASIC12.94□□□□□ -0.34
GDNFP39905 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.94□□□□□ -0.34
GDNFP39905 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GDNFP39905 Z97205.2-201ENST00000564697 1639 ntBASIC12.94□□□□□ -0.34
GDNFP39905 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GDNFP39905 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
GDNFP39905 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GDNFP39905 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
GDNFP39905 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GDNFP39905 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
GDNFP39905 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
GDNFP39905 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GDNFP39905 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.94□□□□□ -0.34
GDNFP39905 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
GDNFP39905 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
GDNFP39905 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GDNFP39905 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GDNFP39905 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GDNFP39905 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GDNFP39905 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.93□□□□□ -0.34
GDNFP39905 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
GDNFP39905 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GDNFP39905 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GDNFP39905 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GDNFP39905 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GDNFP39905 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GDNFP39905 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
GDNFP39905 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
GDNFP39905 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC12.93□□□□□ -0.34
GDNFP39905 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
GDNFP39905 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
GDNFP39905 AC068760.1-201ENST00000493579 1953 ntBASIC12.93□□□□□ -0.34
GDNFP39905 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
GDNFP39905 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
GDNFP39905 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GDNFP39905 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
GDNFP39905 PNMT-202ENST00000394246 821 ntTSL 2 BASIC12.93□□□□□ -0.34
GDNFP39905 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GDNFP39905 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms