Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC14.88□□□□□ -0.03
LTBRP36941 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC14.88□□□□□ -0.03
LTBRP36941 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC14.88□□□□□ -0.03
LTBRP36941 AC011462.4-201ENST00000616866 449 ntBASIC14.88□□□□□ -0.03
LTBRP36941 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LTBRP36941 RARS-210ENST00000626454 177 ntTSL 5 BASIC14.88□□□□□ -0.03
LTBRP36941 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.88□□□□□ -0.03
LTBRP36941 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
LTBRP36941 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
LTBRP36941 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC14.88□□□□□ -0.03
LTBRP36941 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LTBRP36941 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.88□□□□□ -0.03
LTBRP36941 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LTBRP36941 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
LTBRP36941 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LTBRP36941 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.88□□□□□ -0.03
LTBRP36941 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.88□□□□□ -0.03
LTBRP36941 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LTBRP36941 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LTBRP36941 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LTBRP36941 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LTBRP36941 AL365181.1-201ENST00000564032 1828 ntBASIC14.87□□□□□ -0.03
LTBRP36941 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LTBRP36941 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC14.87□□□□□ -0.03
LTBRP36941 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LTBRP36941 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LTBRP36941 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LTBRP36941 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LTBRP36941 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LTBRP36941 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.87□□□□□ -0.03
LTBRP36941 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LTBRP36941 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LTBRP36941 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.87□□□□□ -0.03
LTBRP36941 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.87□□□□□ -0.03
LTBRP36941 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LTBRP36941 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LTBRP36941 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
LTBRP36941 KRT8P18-201ENST00000413425 1445 ntBASIC14.87□□□□□ -0.03
LTBRP36941 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LTBRP36941 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LTBRP36941 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LTBRP36941 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
LTBRP36941 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
LTBRP36941 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.87□□□□□ -0.03
LTBRP36941 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LTBRP36941 RN7SL128P-201ENST00000467883 305 ntBASIC14.87□□□□□ -0.03
LTBRP36941 RN7SL147P-201ENST00000487345 298 ntBASIC14.87□□□□□ -0.03
LTBRP36941 SEPHS2P1-201ENST00000511618 1162 ntBASIC14.87□□□□□ -0.03
LTBRP36941 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
LTBRP36941 DLK1-205ENST00000556051 469 ntTSL 2 BASIC14.87□□□□□ -0.03
LTBRP36941 HNRNPA1P5-201ENST00000558213 966 ntBASIC14.87□□□□□ -0.03
LTBRP36941 MED11-202ENST00000573708 802 ntTSL 2 BASIC14.87□□□□□ -0.03
LTBRP36941 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC14.87□□□□□ -0.03
LTBRP36941 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC14.87□□□□□ -0.03
LTBRP36941 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LTBRP36941 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
LTBRP36941 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LTBRP36941 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
LTBRP36941 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LTBRP36941 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
LTBRP36941 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.87□□□□□ -0.03
LTBRP36941 PDXDC2P-206ENST00000534700 1315 ntBASIC14.87□□□□□ -0.03
LTBRP36941 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC14.87□□□□□ -0.03
LTBRP36941 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.87□□□□□ -0.03
LTBRP36941 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LTBRP36941 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LTBRP36941 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
LTBRP36941 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC14.87□□□□□ -0.03
LTBRP36941 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LTBRP36941 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LTBRP36941 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LTBRP36941 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LTBRP36941 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LTBRP36941 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LTBRP36941 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LTBRP36941 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LTBRP36941 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LTBRP36941 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LTBRP36941 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.86□□□□□ -0.03
LTBRP36941 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LTBRP36941 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LTBRP36941 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC14.86□□□□□ -0.03
LTBRP36941 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.86□□□□□ -0.03
LTBRP36941 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LTBRP36941 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LTBRP36941 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LTBRP36941 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LTBRP36941 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC14.86□□□□□ -0.03
LTBRP36941 AC104961.1-201ENST00000427605 771 ntBASIC14.86□□□□□ -0.03
LTBRP36941 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC14.86□□□□□ -0.03
LTBRP36941 STK24P1-201ENST00000455035 1291 ntBASIC14.86□□□□□ -0.03
LTBRP36941 AC092896.1-201ENST00000465850 380 ntBASIC14.86□□□□□ -0.03
LTBRP36941 AC025186.1-201ENST00000478174 870 ntBASIC14.86□□□□□ -0.03
LTBRP36941 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC14.86□□□□□ -0.03
LTBRP36941 AC087203.1-201ENST00000532111 1181 ntBASIC14.86□□□□□ -0.03
LTBRP36941 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC14.86□□□□□ -0.03
LTBRP36941 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC14.86□□□□□ -0.03
LTBRP36941 MIR4265-201ENST00000582152 99 ntBASIC14.86□□□□□ -0.03
LTBRP36941 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC14.86□□□□□ -0.03
LTBRP36941 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms