Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 PPIA-208ENST00000489459 907 ntTSL 2 BASIC18.28■□□□□ 0.52
RFC4P35249 RNA5SP406-201ENST00000516106 112 ntBASIC18.28■□□□□ 0.52
RFC4P35249 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
RFC4P35249 ELP5-212ENST00000574255 671 ntTSL 2 BASIC18.28■□□□□ 0.52
RFC4P35249 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC18.28■□□□□ 0.52
RFC4P35249 NAMA-206ENST00000605377 509 ntTSL 5 BASIC18.28■□□□□ 0.52
RFC4P35249 PPIA-210ENST00000620047 827 ntTSL 5 BASIC18.28■□□□□ 0.52
RFC4P35249 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC18.28■□□□□ 0.52
RFC4P35249 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.28■□□□□ 0.52
RFC4P35249 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RFC4P35249 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RFC4P35249 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFC4P35249 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
RFC4P35249 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC18.28■□□□□ 0.52
RFC4P35249 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC18.28■□□□□ 0.52
RFC4P35249 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFC4P35249 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC18.28■□□□□ 0.52
RFC4P35249 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFC4P35249 PCDHGB8P-201ENST00000502926 1973 ntBASIC18.28■□□□□ 0.52
RFC4P35249 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFC4P35249 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFC4P35249 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC18.27■□□□□ 0.52
RFC4P35249 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFC4P35249 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFC4P35249 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFC4P35249 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFC4P35249 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFC4P35249 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
RFC4P35249 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC18.27■□□□□ 0.52
RFC4P35249 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RFC4P35249 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFC4P35249 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC18.27■□□□□ 0.52
RFC4P35249 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFC4P35249 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFC4P35249 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFC4P35249 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFC4P35249 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
RFC4P35249 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC18.27■□□□□ 0.52
RFC4P35249 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFC4P35249 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC18.27■□□□□ 0.52
RFC4P35249 AC098934.1-203ENST00000442868 1262 ntBASIC18.27■□□□□ 0.52
RFC4P35249 DDX39AP1-201ENST00000445147 1181 ntBASIC18.27■□□□□ 0.52
RFC4P35249 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC18.27■□□□□ 0.52
RFC4P35249 RN7SL23P-201ENST00000484055 275 ntBASIC18.27■□□□□ 0.52
RFC4P35249 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC18.27■□□□□ 0.52
RFC4P35249 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC18.27■□□□□ 0.52
RFC4P35249 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
RFC4P35249 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFC4P35249 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFC4P35249 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
RFC4P35249 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFC4P35249 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RFC4P35249 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RFC4P35249 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
RFC4P35249 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RFC4P35249 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RFC4P35249 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RFC4P35249 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RFC4P35249 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RFC4P35249 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RFC4P35249 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RFC4P35249 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RFC4P35249 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC4P35249 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFC4P35249 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.26■□□□□ 0.51
RFC4P35249 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.26■□□□□ 0.51
RFC4P35249 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.26■□□□□ 0.51
RFC4P35249 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
RFC4P35249 FER1L4-210ENST00000615531 5998 ntBASIC18.26■□□□□ 0.51
RFC4P35249 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC18.26■□□□□ 0.51
RFC4P35249 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC4P35249 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC4P35249 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC4P35249 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC4P35249 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC4P35249 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC4P35249 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC4P35249 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC4P35249 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC4P35249 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC4P35249 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RFC4P35249 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC4P35249 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFC4P35249 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC18.26■□□□□ 0.51
RFC4P35249 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC18.26■□□□□ 0.51
RFC4P35249 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC18.26■□□□□ 0.51
RFC4P35249 AC140658.4-201ENST00000561990 352 ntBASIC18.26■□□□□ 0.51
RFC4P35249 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC18.26■□□□□ 0.51
RFC4P35249 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC18.26■□□□□ 0.51
RFC4P35249 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
RFC4P35249 AC012073.1-201ENST00000606114 1108 ntBASIC18.26■□□□□ 0.51
RFC4P35249 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RFC4P35249 LINC00244-201ENST00000625073 613 ntBASIC18.26■□□□□ 0.51
RFC4P35249 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC18.26■□□□□ 0.51
RFC4P35249 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC18.26■□□□□ 0.51
RFC4P35249 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC4P35249 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RFC4P35249 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RFC4P35249 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RFC4P35249 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms