Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP6P35125 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
USP6P35125 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP6P35125 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
USP6P35125 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
USP6P35125 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP6P35125 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP6P35125 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC19.47■□□□□ 0.71
USP6P35125 SAT1-201ENST00000379251 801 ntTSL 2 BASIC19.47■□□□□ 0.71
USP6P35125 SAT1-202ENST00000379253 909 ntTSL 2 BASIC19.47■□□□□ 0.71
USP6P35125 SAT1-203ENST00000379254 868 ntTSL 3 BASIC19.47■□□□□ 0.71
USP6P35125 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP6P35125 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
USP6P35125 AC234644.1-201ENST00000406065 370 ntBASIC19.47■□□□□ 0.71
USP6P35125 PSMD4P1-201ENST00000433951 1109 ntBASIC19.47■□□□□ 0.71
USP6P35125 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
USP6P35125 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USP6P35125 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
USP6P35125 AC022447.6-201ENST00000515522 438 ntBASIC19.47■□□□□ 0.71
USP6P35125 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC19.47■□□□□ 0.71
USP6P35125 C2orf69P1-201ENST00000563532 1093 ntBASIC19.47■□□□□ 0.71
USP6P35125 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC19.47■□□□□ 0.71
USP6P35125 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP6P35125 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC19.47■□□□□ 0.71
USP6P35125 LINC00115-201ENST00000473798 1317 ntBASIC19.47■□□□□ 0.71
USP6P35125 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP6P35125 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP6P35125 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC19.46■□□□□ 0.71
USP6P35125 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP6P35125 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
USP6P35125 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC19.46■□□□□ 0.71
USP6P35125 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC19.46■□□□□ 0.71
USP6P35125 AC008741.2-201ENST00000612792 3115 ntBASIC19.46■□□□□ 0.71
USP6P35125 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP6P35125 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP6P35125 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP6P35125 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC19.46■□□□□ 0.71
USP6P35125 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC19.46■□□□□ 0.71
USP6P35125 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC19.46■□□□□ 0.71
USP6P35125 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC19.46■□□□□ 0.71
USP6P35125 MIR4472-1-201ENST00000584349 80 ntBASIC19.46■□□□□ 0.71
USP6P35125 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC19.46■□□□□ 0.71
USP6P35125 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
USP6P35125 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
USP6P35125 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP6P35125 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP6P35125 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP6P35125 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP6P35125 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
USP6P35125 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP6P35125 AC019109.1-201ENST00000401725 1874 ntBASIC19.46■□□□□ 0.71
USP6P35125 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP6P35125 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
USP6P35125 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
USP6P35125 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC19.46■□□□□ 0.71
USP6P35125 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
USP6P35125 AC092384.3-202ENST00000564646 2873 ntBASIC19.45■□□□□ 0.7
USP6P35125 GPI-205ENST00000586425 1799 ntTSL 5 BASIC19.45■□□□□ 0.7
USP6P35125 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC19.45■□□□□ 0.7
USP6P35125 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP6P35125 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP6P35125 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC19.45■□□□□ 0.7
USP6P35125 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP6P35125 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP6P35125 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP6P35125 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP6P35125 MIR1227-201ENST00000408484 88 ntBASIC19.45■□□□□ 0.7
USP6P35125 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC19.45■□□□□ 0.7
USP6P35125 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP6P35125 AC108734.2-201ENST00000420887 1069 ntBASIC19.45■□□□□ 0.7
USP6P35125 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP6P35125 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC19.45■□□□□ 0.7
USP6P35125 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC19.45■□□□□ 0.7
USP6P35125 RN7SL788P-201ENST00000460504 316 ntBASIC19.45■□□□□ 0.7
USP6P35125 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
USP6P35125 LINC00244-201ENST00000625073 613 ntBASIC19.45■□□□□ 0.7
USP6P35125 HELLS-212ENST00000630929 400 ntTSL 5 BASIC19.45■□□□□ 0.7
USP6P35125 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP6P35125 FES-204ENST00000414248 2327 ntTSL 2 BASIC19.45■□□□□ 0.7
USP6P35125 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP6P35125 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP6P35125 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
USP6P35125 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP6P35125 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC19.45■□□□□ 0.7
USP6P35125 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP6P35125 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
USP6P35125 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP6P35125 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP6P35125 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP6P35125 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
USP6P35125 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP6P35125 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
USP6P35125 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP6P35125 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
USP6P35125 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP6P35125 AC006987.1-201ENST00000413610 527 ntBASIC19.44■□□□□ 0.7
USP6P35125 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
USP6P35125 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC19.44■□□□□ 0.7
USP6P35125 GCSHP3-201ENST00000431120 391 ntBASIC19.44■□□□□ 0.7
USP6P35125 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms