Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
COL8A2P25067 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.48□□□□□ -0.41
COL8A2P25067 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COL8A2P25067 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COL8A2P25067 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COL8A2P25067 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COL8A2P25067 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
COL8A2P25067 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COL8A2P25067 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COL8A2P25067 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COL8A2P25067 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.48□□□□□ -0.41
COL8A2P25067 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.48□□□□□ -0.41
COL8A2P25067 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
COL8A2P25067 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COL8A2P25067 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
COL8A2P25067 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
COL8A2P25067 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
COL8A2P25067 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
COL8A2P25067 AC016700.1-201ENST00000429424 312 ntBASIC12.48□□□□□ -0.41
COL8A2P25067 KLF2P1-201ENST00000447438 1042 ntBASIC12.48□□□□□ -0.41
COL8A2P25067 ADM-202ENST00000524948 584 ntTSL 2 BASIC12.48□□□□□ -0.41
COL8A2P25067 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.48□□□□□ -0.41
COL8A2P25067 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COL8A2P25067 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC12.48□□□□□ -0.41
COL8A2P25067 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC12.48□□□□□ -0.41
COL8A2P25067 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC12.48□□□□□ -0.41
COL8A2P25067 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC12.48□□□□□ -0.41
COL8A2P25067 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC12.48□□□□□ -0.41
COL8A2P25067 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COL8A2P25067 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC12.48□□□□□ -0.41
COL8A2P25067 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.48□□□□□ -0.41
COL8A2P25067 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
COL8A2P25067 AC027601.3-201ENST00000622907 509 ntBASIC12.48□□□□□ -0.41
COL8A2P25067 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.48□□□□□ -0.41
COL8A2P25067 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.48□□□□□ -0.41
COL8A2P25067 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC12.48□□□□□ -0.41
COL8A2P25067 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.48□□□□□ -0.41
COL8A2P25067 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COL8A2P25067 PKD1P5-201ENST00000532415 10291 ntBASIC12.48□□□□□ -0.41
COL8A2P25067 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
COL8A2P25067 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
COL8A2P25067 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COL8A2P25067 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
COL8A2P25067 LINC01101-201ENST00000622953 1884 ntBASIC12.48□□□□□ -0.41
COL8A2P25067 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COL8A2P25067 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COL8A2P25067 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.48□□□□□ -0.41
COL8A2P25067 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
COL8A2P25067 PCDHA3-202ENST00000532566 4594 ntBASIC12.48□□□□□ -0.41
COL8A2P25067 AC005912.2-201ENST00000619492 2400 ntBASIC12.48□□□□□ -0.41
COL8A2P25067 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.48□□□□□ -0.41
COL8A2P25067 AC079781.5-202ENST00000641784 3743 ntBASIC12.48□□□□□ -0.41
COL8A2P25067 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
COL8A2P25067 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.47□□□□□ -0.41
COL8A2P25067 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
COL8A2P25067 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
COL8A2P25067 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
COL8A2P25067 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.47□□□□□ -0.41
COL8A2P25067 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.47□□□□□ -0.41
COL8A2P25067 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
COL8A2P25067 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COL8A2P25067 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COL8A2P25067 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COL8A2P25067 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC12.47□□□□□ -0.41
COL8A2P25067 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COL8A2P25067 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COL8A2P25067 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COL8A2P25067 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
COL8A2P25067 AC007191.1-201ENST00000623179 2995 ntBASIC12.47□□□□□ -0.41
COL8A2P25067 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.47□□□□□ -0.41
COL8A2P25067 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
COL8A2P25067 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
COL8A2P25067 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
COL8A2P25067 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COL8A2P25067 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
COL8A2P25067 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC12.47□□□□□ -0.41
COL8A2P25067 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
COL8A2P25067 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
COL8A2P25067 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
COL8A2P25067 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
COL8A2P25067 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
COL8A2P25067 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
COL8A2P25067 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.47□□□□□ -0.41
COL8A2P25067 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC12.47□□□□□ -0.41
COL8A2P25067 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC12.47□□□□□ -0.41
COL8A2P25067 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.47□□□□□ -0.41
COL8A2P25067 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC12.47□□□□□ -0.41
COL8A2P25067 CICP12-201ENST00000455801 843 ntBASIC12.47□□□□□ -0.41
COL8A2P25067 RPL18P13-201ENST00000478088 569 ntBASIC12.47□□□□□ -0.41
COL8A2P25067 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC12.47□□□□□ -0.41
COL8A2P25067 GCOM2-201ENST00000509133 1104 ntBASIC12.47□□□□□ -0.41
COL8A2P25067 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.47□□□□□ -0.41
COL8A2P25067 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.47□□□□□ -0.41
COL8A2P25067 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC12.47□□□□□ -0.41
COL8A2P25067 AC131206.1-201ENST00000538078 1211 ntBASIC12.47□□□□□ -0.41
COL8A2P25067 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC12.47□□□□□ -0.41
COL8A2P25067 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC12.47□□□□□ -0.41
COL8A2P25067 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.47□□□□□ -0.41
COL8A2P25067 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC12.47□□□□□ -0.41
COL8A2P25067 AC005324.6-201ENST00000587972 613 ntBASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms