Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL1P22362 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CCL1P22362 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL1P22362 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CCL1P22362 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CCL1P22362 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL1P22362 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL1P22362 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.68□□□□□ -0.38
CCL1P22362 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CCL1P22362 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL1P22362 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.68□□□□□ -0.38
CCL1P22362 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.68□□□□□ -0.38
CCL1P22362 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC12.68□□□□□ -0.38
CCL1P22362 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.68□□□□□ -0.38
CCL1P22362 AP003171.2-201ENST00000528208 925 ntBASIC12.68□□□□□ -0.38
CCL1P22362 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL1P22362 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CCL1P22362 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.68□□□□□ -0.38
CCL1P22362 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC12.68□□□□□ -0.38
CCL1P22362 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC12.68□□□□□ -0.38
CCL1P22362 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.68□□□□□ -0.38
CCL1P22362 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC12.68□□□□□ -0.38
CCL1P22362 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.68□□□□□ -0.38
CCL1P22362 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC12.68□□□□□ -0.38
CCL1P22362 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
CCL1P22362 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CCL1P22362 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
CCL1P22362 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL1P22362 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL1P22362 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.68□□□□□ -0.38
CCL1P22362 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CCL1P22362 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL1P22362 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL1P22362 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL1P22362 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CCL1P22362 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL1P22362 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.68□□□□□ -0.38
CCL1P22362 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL1P22362 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CCL1P22362 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL1P22362 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL1P22362 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CCL1P22362 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.68□□□□□ -0.38
CCL1P22362 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL1P22362 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL1P22362 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL1P22362 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CCL1P22362 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL1P22362 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCL1P22362 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL1P22362 AC097376.2-205ENST00000610159 5334 ntBASIC12.67□□□□□ -0.38
CCL1P22362 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCL1P22362 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCL1P22362 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL1P22362 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CCL1P22362 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CCL1P22362 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL1P22362 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL1P22362 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL1P22362 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL1P22362 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL1P22362 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.67□□□□□ -0.38
CCL1P22362 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL1P22362 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCL1P22362 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL1P22362 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CCL1P22362 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL1P22362 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL1P22362 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCL1P22362 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.67□□□□□ -0.38
CCL1P22362 AC005229.1-201ENST00000392885 409 ntBASIC12.67□□□□□ -0.38
CCL1P22362 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL1P22362 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL1P22362 GRAP-202ENST00000395635 834 ntTSL 2 BASIC12.67□□□□□ -0.38
CCL1P22362 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC12.67□□□□□ -0.38
CCL1P22362 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CCL1P22362 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCL1P22362 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.67□□□□□ -0.38
CCL1P22362 CD8B2-202ENST00000417670 633 ntBASIC12.67□□□□□ -0.38
CCL1P22362 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.67□□□□□ -0.38
CCL1P22362 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL1P22362 AL355864.2-201ENST00000447420 863 ntBASIC12.67□□□□□ -0.38
CCL1P22362 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC12.67□□□□□ -0.38
CCL1P22362 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.67□□□□□ -0.38
CCL1P22362 TERF1P3-201ENST00000505638 1227 ntBASIC12.67□□□□□ -0.38
CCL1P22362 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCL1P22362 RNA5SP486-201ENST00000515961 83 ntBASIC12.67□□□□□ -0.38
CCL1P22362 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCL1P22362 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.67□□□□□ -0.38
CCL1P22362 AC005586.2-201ENST00000563946 837 ntBASIC12.67□□□□□ -0.38
CCL1P22362 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
CCL1P22362 AC008825.2-201ENST00000603374 718 ntBASIC12.67□□□□□ -0.38
CCL1P22362 ECM1P1-201ENST00000604092 1279 ntBASIC12.67□□□□□ -0.38
CCL1P22362 AC002472.3-201ENST00000640124 621 ntBASIC12.67□□□□□ -0.38
CCL1P22362 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CCL1P22362 AC089987.1-201ENST00000551654 2209 ntBASIC12.67□□□□□ -0.38
CCL1P22362 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL1P22362 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL1P22362 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL1P22362 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms