Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KCNA3P22001 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
KCNA3P22001 OR10N1P-201ENST00000392758 869 ntBASIC17.71■□□□□ 0.43
KCNA3P22001 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC17.71■□□□□ 0.43
KCNA3P22001 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC17.71■□□□□ 0.43
KCNA3P22001 RN7SL288P-201ENST00000490496 291 ntBASIC17.71■□□□□ 0.43
KCNA3P22001 AC092612.1-201ENST00000514501 998 ntBASIC17.71■□□□□ 0.43
KCNA3P22001 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNA3P22001 F11R-204ENST00000537746 1245 ntTSL 2 BASIC17.71■□□□□ 0.43
KCNA3P22001 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC17.71■□□□□ 0.43
KCNA3P22001 COQ4-204ENST00000608951 781 ntTSL 2 BASIC17.71■□□□□ 0.43
KCNA3P22001 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC17.71■□□□□ 0.43
KCNA3P22001 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KCNA3P22001 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNA3P22001 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNA3P22001 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
KCNA3P22001 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNA3P22001 AC019109.1-201ENST00000401725 1874 ntBASIC17.71■□□□□ 0.43
KCNA3P22001 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNA3P22001 AL596257.1-201ENST00000641463 2694 ntBASIC17.71■□□□□ 0.43
KCNA3P22001 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KCNA3P22001 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
KCNA3P22001 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.42
KCNA3P22001 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
KCNA3P22001 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KCNA3P22001 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
KCNA3P22001 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
KCNA3P22001 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
KCNA3P22001 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
KCNA3P22001 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KCNA3P22001 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KCNA3P22001 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KCNA3P22001 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.7■□□□□ 0.42
KCNA3P22001 AC112693.3-201ENST00000624819 1983 ntBASIC17.7■□□□□ 0.42
KCNA3P22001 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.7■□□□□ 0.42
KCNA3P22001 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KCNA3P22001 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.7■□□□□ 0.42
KCNA3P22001 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC17.7■□□□□ 0.42
KCNA3P22001 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
KCNA3P22001 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
KCNA3P22001 OR52M2P-201ENST00000414298 959 ntBASIC17.7■□□□□ 0.42
KCNA3P22001 PGAM1P11-201ENST00000416729 680 ntBASIC17.7■□□□□ 0.42
KCNA3P22001 AL080243.1-201ENST00000423293 1060 ntBASIC17.7■□□□□ 0.42
KCNA3P22001 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC17.7■□□□□ 0.42
KCNA3P22001 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC17.7■□□□□ 0.42
KCNA3P22001 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC17.7■□□□□ 0.42
KCNA3P22001 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC17.7■□□□□ 0.42
KCNA3P22001 KNOP1P1-201ENST00000542108 989 ntBASIC17.7■□□□□ 0.42
KCNA3P22001 VENTXP3-201ENST00000546480 773 ntBASIC17.7■□□□□ 0.42
KCNA3P22001 KLF17P1-201ENST00000547105 1126 ntBASIC17.7■□□□□ 0.42
KCNA3P22001 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC17.7■□□□□ 0.42
KCNA3P22001 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC17.7■□□□□ 0.42
KCNA3P22001 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KCNA3P22001 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC17.7■□□□□ 0.42
KCNA3P22001 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC17.7■□□□□ 0.42
KCNA3P22001 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KCNA3P22001 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.7■□□□□ 0.42
KCNA3P22001 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
KCNA3P22001 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC17.7■□□□□ 0.42
KCNA3P22001 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC17.7■□□□□ 0.42
KCNA3P22001 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
KCNA3P22001 AL513477.1-201ENST00000602865 2407 ntBASIC17.7■□□□□ 0.42
KCNA3P22001 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KCNA3P22001 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
KCNA3P22001 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
KCNA3P22001 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
KCNA3P22001 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.7■□□□□ 0.42
KCNA3P22001 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC17.7■□□□□ 0.42
KCNA3P22001 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
KCNA3P22001 CICP23-201ENST00000605013 2741 ntBASIC17.7■□□□□ 0.42
KCNA3P22001 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
KCNA3P22001 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
KCNA3P22001 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KCNA3P22001 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.69■□□□□ 0.42
KCNA3P22001 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KCNA3P22001 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KCNA3P22001 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.69■□□□□ 0.42
KCNA3P22001 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17.69■□□□□ 0.42
KCNA3P22001 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC17.69■□□□□ 0.42
KCNA3P22001 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
KCNA3P22001 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC17.69■□□□□ 0.42
KCNA3P22001 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KCNA3P22001 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KCNA3P22001 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
KCNA3P22001 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KCNA3P22001 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
KCNA3P22001 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KCNA3P22001 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
KCNA3P22001 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC17.69■□□□□ 0.42
KCNA3P22001 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC17.69■□□□□ 0.42
KCNA3P22001 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC17.69■□□□□ 0.42
KCNA3P22001 RN7SL788P-201ENST00000460504 316 ntBASIC17.69■□□□□ 0.42
KCNA3P22001 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC17.69■□□□□ 0.42
KCNA3P22001 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KCNA3P22001 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC17.69■□□□□ 0.42
KCNA3P22001 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC17.69■□□□□ 0.42
KCNA3P22001 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC17.69■□□□□ 0.42
KCNA3P22001 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC17.69■□□□□ 0.42
KCNA3P22001 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KCNA3P22001 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms